Analysis of interatomic Contacts of Structural Units in PDB entry:
5FUC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FUC entry

There are 6 chains in PDB entry 5FUC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 19MET 184
B
 SER 21MET 184
C
 PRO 98THR 297
D
 PRO 94GLU 298
E
 GLN 3GLN 120
V
 ASP 1SER 124
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 5FUC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 46Right-handed alpha
Helix 2
2
A
68 72Right-handed 310
Helix 3
3
A
79 102Right-handed alpha
Helix 4
4
A
108 128Right-handed alpha
Helix 5
5
A
140 154Right-handed alpha
Helix 6
6
A
155 183Right-handed alpha
Helix 7
7
B
21 47Right-handed alpha
Helix 8
8
B
68 72Right-handed 310
Helix 9
9
B
79 102Right-handed alpha
Helix 10
10
B
108 130Right-handed alpha
Helix 11
11
B
140 152Right-handed alpha
Helix 12
12
B
155 182Right-handed alpha
Helix 13
13
C
192 194Right-handed 310
Helix 14
14
E
25 32Right-handed alpha
Helix 15
15
E
62 65Right-handed 310
Helix 16
16
E
100 104Right-handed 310
Helix 17
17
V
25 32Right-handed alpha
Helix 18
18
V
74 76Right-handed 310
Helix 19
19
V
87 91Right-handed 310
Helix 20
20
V
100 104Right-handed 310
Helix 21
21
V
108 112Right-handed 310
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There are 16 sheets in PDB entry 5FUC. Click on sheet of interest to get list of strands forming it: CA, CB, CC, A, DB, C, DD, DE, EA, EB, EC, ED, VA, VB, VC, VD,

There are 7 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
101 103first strand
Strand 2
C
111 115anti-parallel
Strand 3
C
155 159anti-parallel
Strand 4
C
143 148anti-parallel
Strand 5
C
127 134anti-parallel
Strand 6
C
168 175anti-parallel
Strand 7
C
187 190anti-parallel
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There are 3 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
201 206first strand
Strand 2
C
215 220anti-parallel
Strand 3
C
257 260anti-parallel
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There are 4 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
247 250first strand
Strand 2
C
232 240anti-parallel
Strand 3
C
269 277anti-parallel
Strand 4
C
291 293anti-parallel
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There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
101 103first strand
Strand 2
D
111 115anti-parallel
Strand 3
D
155 159anti-parallel
Strand 4
D
143 148anti-parallel
Strand 5
D
126 132anti-parallel
Strand 6
D
169 176anti-parallel
Strand 7
D
181 182parallel
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There are 7 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
101 103first strand
Strand 2
D
111 115anti-parallel
Strand 3
D
155 159anti-parallel
Strand 4
D
143 148anti-parallel
Strand 5
D
126 132anti-parallel
Strand 6
D
169 176anti-parallel
Strand 7
D
187 189anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
181 182first strand
Strand 2
D
169 176parallel
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There are 3 strands in DD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
201 206first strand
Strand 2
D
215 220anti-parallel
Strand 3
D
257 260anti-parallel
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There are 4 strands in DE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
247 250first strand
Strand 2
D
232 240anti-parallel
Strand 3
D
269 277anti-parallel
Strand 4
D
291 293anti-parallel
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There are 2 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
5 7first strand
Strand 2
E
21 23anti-parallel
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There are 5 strands in EB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
58 60first strand
Strand 2
E
49 51anti-parallel
Strand 3
E
33 36anti-parallel
Strand 4
E
96 99anti-parallel
Strand 5
E
114 115anti-parallel
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There are 2 strands in EC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
68 69first strand
Strand 2
E
82 83anti-parallel
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There are 2 strands in ED sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
72 73first strand
Strand 2
E
78 79anti-parallel
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There are 4 strands in VA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
V
4 7first strand
Strand 2
V
18 24anti-parallel
Strand 3
V
78 83anti-parallel
Strand 4
V
68 73anti-parallel
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There are 4 strands in VB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
V
10 13first strand
Strand 2
V
119 124parallel
Strand 3
V
92 99anti-parallel
Strand 4
V
114 115anti-parallel
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There are 6 strands in VC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
V
10 13first strand
Strand 2
V
119 124parallel
Strand 3
V
92 99anti-parallel
Strand 4
V
33 39anti-parallel
Strand 5
V
46 51anti-parallel
Strand 6
V
58 60anti-parallel
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There are 2 strands in VD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
V
114 115first strand
Strand 2
V
92 99anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il