Analysis of interatomic Contacts of Structural Units in PDB entry:
5FUJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FUJ entry

There are 2 chains in PDB entry 5FUJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1LEU 236
B
 SER 1LEU 236
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 5FUJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 26Right-handed alpha
Helix 2
2
A
37 50Right-handed alpha
Helix 3
3
A
52 65Right-handed alpha
Helix 4
4
A
74 80Right-handed 310
Helix 5
5
A
104 113Right-handed alpha
Helix 6
6
A
123 141Right-handed alpha
Helix 7
7
A
147 165Right-handed alpha
Helix 8
8
A
169 172Right-handed 310
Helix 9
9
A
177 187Right-handed alpha
Helix 10
10
A
203 218Right-handed alpha
Helix 11
11
B
17 26Right-handed alpha
Helix 12
12
B
37 50Right-handed alpha
Helix 13
13
B
52 65Right-handed alpha
Helix 14
14
B
74 80Right-handed 310
Helix 15
15
B
104 113Right-handed alpha
Helix 16
16
B
123 141Right-handed alpha
Helix 17
17
B
147 165Right-handed alpha
Helix 18
18
B
169 172Right-handed 310
Helix 19
19
B
177 187Right-handed alpha
Helix 20
20
B
203 218Right-handed alpha
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There are 2 sheets in PDB entry 5FUJ. Click on sheet of interest to get list of strands forming it: AA, BA,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
120 122first strand
Strand 2
A
174 176anti-parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
120 122first strand
Strand 2
B
174 176anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il