Analysis of interatomic Contacts of Structural Units in PDB entry:
5FUO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FUO entry

There are 3 chains in PDB entry 5FUO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 5LEU 583
H
 GLU 1CYS 224
L
 ASP 1CYS 217
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 36 helices in PDB entry 5FUO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 15Right-handed alpha
Helix 2
2
A
15 31Right-handed alpha
Helix 3
3
A
35 55Right-handed alpha
Helix 4
4
A
65 75Right-handed alpha
Helix 5
5
A
86 92Right-handed alpha
Helix 6
6
A
96 105Right-handed alpha
Helix 7
7
A
119 130Right-handed alpha
Helix 8
8
A
130 146Right-handed alpha
Helix 9
9
A
150 169Right-handed alpha
Helix 10
10
A
173 223Right-handed alpha
Helix 11
11
A
227 247Right-handed alpha
Helix 12
12
A
249 267Right-handed alpha
Helix 13
13
A
268 271Right-handed 310
Helix 14
14
A
282 293Right-handed alpha
Helix 15
15
A
305 310Right-handed alpha
Helix 16
16
A
314 322Right-handed alpha
Helix 17
17
A
322 337Right-handed alpha
Helix 18
18
A
342 361Right-handed alpha
Helix 19
19
A
365 370Right-handed alpha
Helix 20
20
A
372 415Right-handed alpha
Helix 21
21
A
419 438Right-handed alpha
Helix 22
22
A
444 467Right-handed alpha
Helix 23
23
A
470 479Right-handed alpha
Helix 24
24
A
483 491Right-handed alpha
Helix 25
25
A
510 516Right-handed 310
Helix 26
26
A
517 536Right-handed alpha
Helix 27
27
A
543 559Right-handed alpha
Helix 28
28
A
565 574Right-handed alpha
Helix 29
29
A
575 580Right-handed alpha
Helix 30
30
H
86 90Right-handed 310
Helix 31
31
H
164 166Right-handed 310
Helix 32
32
H
193 196Right-handed 310
Helix 33
33
H
209 212Right-handed 310
Helix 34
34
L
80 84Right-handed 310
Helix 35
35
L
124 129Right-handed alpha
Helix 36
36
L
186 191Right-handed alpha
Back to top of page

There are 14 sheets in PDB entry 5FUO. Click on sheet of interest to get list of strands forming it: HA, HB, HC, HD, HE, HF, LA, LB, LC, LD, LE, LF, LG, LH,

There are 4 strands in HA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
3 7first strand
Strand 2
H
18 25anti-parallel
Strand 3
H
77 82anti-parallel
Strand 4
H
67 72anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in HB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
11 12first strand
Strand 2
H
115 119parallel
Strand 3
H
91 97anti-parallel
Strand 4
H
34 39anti-parallel
Strand 5
H
46 51anti-parallel
Strand 6
H
57 59anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in HC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
128 131first strand
Strand 2
H
145 153anti-parallel
Strand 3
H
184 191anti-parallel
Strand 4
H
177 178parallel
Back to list of sheets
Back to top of page

There are 4 strands in HD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
128 131first strand
Strand 2
H
145 153anti-parallel
Strand 3
H
184 191anti-parallel
Strand 4
H
171 173anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in HE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
177 178first strand
Strand 2
H
184 191parallel
Back to list of sheets
Back to top of page

There are 3 strands in HF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
159 162first strand
Strand 2
H
203 208anti-parallel
Strand 3
H
213 218anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in LA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
4 7first strand
Strand 2
L
19 25anti-parallel
Strand 3
L
71 76anti-parallel
Strand 4
L
63 68anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in LB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
11 14first strand
Strand 2
L
105 110parallel
Strand 3
L
85 91anti-parallel
Strand 4
L
100 101anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in LC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
11 14first strand
Strand 2
L
105 110parallel
Strand 3
L
85 91anti-parallel
Strand 4
L
34 39anti-parallel
Strand 5
L
45 50anti-parallel
Strand 6
L
54 55anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in LD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
100 101first strand
Strand 2
L
85 91anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in LE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
117 118first strand
Strand 2
L
132 142anti-parallel
Strand 3
L
176 185anti-parallel
Strand 4
L
162 166anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in LF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
156 157first strand
Strand 2
L
147 153anti-parallel
Strand 3
L
194 201anti-parallel
Strand 4
L
208 209anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in LG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
156 157first strand
Strand 2
L
147 153anti-parallel
Strand 3
L
194 201anti-parallel
Strand 4
L
212 213anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in LH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
208 209first strand
Strand 2
L
194 201anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il