Analysis of interatomic Contacts of Structural Units in PDB entry:
5FUS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FUS entry

There are 3 chains in PDB entry 5FUS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 9GLN 277
B
 PRO 7ASN 278
C
 CYS 9ASN 278
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 42 helices in PDB entry 5FUS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 16Right-handed 310
Helix 2
2
A
45 62Right-handed alpha
Helix 3
3
A
84 94Right-handed alpha
Helix 4
4
A
96 116Right-handed alpha
Helix 5
5
A
117 120Right-handed 310
Helix 6
6
A
134 143Right-handed alpha
Helix 7
7
A
156 162Right-handed 310
Helix 8
8
A
168 177Right-handed alpha
Helix 9
9
A
178 189Right-handed alpha
Helix 10
10
A
194 200Right-handed alpha
Helix 11
11
A
211 224Right-handed alpha
Helix 12
12
A
226 242Right-handed alpha
Helix 13
13
A
244 260Right-handed alpha
Helix 14
14
A
263 277Right-handed alpha
Helix 15
15
B
13 16Right-handed 310
Helix 16
16
B
45 62Right-handed alpha
Helix 17
17
B
84 95Right-handed alpha
Helix 18
18
B
96 116Right-handed alpha
Helix 19
19
B
117 120Right-handed 310
Helix 20
20
B
134 143Right-handed alpha
Helix 21
21
B
156 162Right-handed 310
Helix 22
22
B
168 177Right-handed alpha
Helix 23
23
B
178 189Right-handed alpha
Helix 24
24
B
194 200Right-handed alpha
Helix 25
25
B
211 224Right-handed alpha
Helix 26
26
B
226 242Right-handed alpha
Helix 27
27
B
244 260Right-handed alpha
Helix 28
28
B
263 278Right-handed alpha
Helix 29
29
C
13 16Right-handed 310
Helix 30
30
C
45 63Right-handed alpha
Helix 31
31
C
84 95Right-handed alpha
Helix 32
32
C
96 116Right-handed alpha
Helix 33
33
C
117 120Right-handed 310
Helix 34
34
C
134 143Right-handed alpha
Helix 35
35
C
156 162Right-handed 310
Helix 36
36
C
168 177Right-handed alpha
Helix 37
37
C
178 189Right-handed alpha
Helix 38
38
C
194 200Right-handed alpha
Helix 39
39
C
211 224Right-handed alpha
Helix 40
40
C
226 242Right-handed alpha
Helix 41
41
C
244 260Right-handed alpha
Helix 42
42
C
263 278Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 5FUS. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB, CA, CB,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 11first strand
Strand 2
A
21 26anti-parallel
Strand 3
A
31 36anti-parallel
Strand 4
A
68 73parallel
Strand 5
A
123 128parallel
Strand 6
A
145 149parallel
Strand 7
A
205 207parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 80first strand
Strand 2
A
131 133parallel
Strand 3
A
153 155parallel
Strand 4
A
192 193anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 11first strand
Strand 2
B
21 26anti-parallel
Strand 3
B
31 36anti-parallel
Strand 4
B
68 73parallel
Strand 5
B
123 128parallel
Strand 6
B
145 149parallel
Strand 7
B
205 207parallel
Back to list of sheets
Back to top of page

There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
78 80first strand
Strand 2
B
131 133parallel
Strand 3
B
153 155parallel
Strand 4
B
192 193anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
10 11first strand
Strand 2
C
21 26anti-parallel
Strand 3
C
31 36anti-parallel
Strand 4
C
68 73parallel
Strand 5
C
123 128parallel
Strand 6
C
145 149parallel
Strand 7
C
205 207parallel
Back to list of sheets
Back to top of page

There are 4 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
78 80first strand
Strand 2
C
131 133parallel
Strand 3
C
153 155parallel
Strand 4
C
192 193anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il