Analysis of interatomic Contacts of Structural Units in PDB entry:
5FV0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FV0 entry

There are 2 chains in PDB entry 5FV0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 968GLU 1479
B
 ALA 968GLU 1479
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 5FV0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1006 1022Right-handed alpha
Helix 2
2
A
1040 1045Right-handed 310
Helix 3
3
A
1056 1081Right-handed alpha
Helix 4
4
A
1085 1093Right-handed alpha
Helix 5
5
A
1107 1114Right-handed alpha
Helix 6
6
A
1114 1128Right-handed alpha
Helix 7
7
A
1129 1132Right-handed 310
Helix 8
8
A
1146 1153Right-handed alpha
Helix 9
9
A
1163 1170Right-handed alpha
Helix 10
10
A
1174 1178Right-handed 310
Helix 11
11
A
1205 1224Right-handed alpha
Helix 12
12
A
1241 1248Right-handed alpha
Helix 13
13
A
1286 1304Right-handed alpha
Helix 14
14
A
1333 1361Right-handed alpha
Helix 15
15
A
1378 1385Right-handed alpha
Helix 16
16
A
1387 1402Right-handed alpha
Helix 17
17
A
1413 1420Right-handed alpha
Helix 18
18
A
1422 1429Right-handed alpha
Helix 19
19
B
1006 1022Right-handed alpha
Helix 20
20
B
1039 1044Right-handed 310
Helix 21
21
B
1056 1071Right-handed alpha
Helix 22
22
B
1107 1113Right-handed alpha
Helix 23
23
B
1114 1127Right-handed alpha
Helix 24
24
B
1127 1132Right-handed alpha
Helix 25
25
B
1146 1153Right-handed alpha
Helix 26
26
B
1163 1169Right-handed alpha
Helix 27
27
B
1174 1178Right-handed 310
Helix 28
28
B
1205 1224Right-handed alpha
Helix 29
29
B
1241 1248Right-handed alpha
Helix 30
30
B
1286 1304Right-handed alpha
Helix 31
31
B
1336 1355Right-handed alpha
Helix 32
32
B
1378 1383Right-handed alpha
Helix 33
33
B
1390 1402Right-handed alpha
Helix 34
34
B
1413 1418Right-handed alpha
Helix 35
35
B
1422 1429Right-handed alpha
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There are 7 sheets in PDB entry 5FV0. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, BB, BC,

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
986 990first strand
Strand 2
A
970 976anti-parallel
Strand 3
A
1195 1197anti-parallel
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There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1048 1052first strand
Strand 2
A
1027 1033parallel
Strand 3
A
1099 1105parallel
Strand 4
A
1135 1139parallel
Strand 5
A
997 1000parallel
Strand 6
A
1155 1158parallel
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There are 8 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1269 1273first strand
Strand 2
A
1257 1263anti-parallel
Strand 3
A
1472 1474anti-parallel
Strand 4
A
1462 1465anti-parallel
Strand 5
A
1434 1436anti-parallel
Strand 6
A
1280 1283parallel
Strand 7
A
1406 1412parallel
Strand 8
A
1372 1376parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1310 1312first strand
Strand 2
A
1329 1331parallel
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There are 3 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
986 990first strand
Strand 2
B
970 976anti-parallel
Strand 3
B
1195 1197anti-parallel
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There are 6 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1048 1052first strand
Strand 2
B
1027 1033parallel
Strand 3
B
1099 1105parallel
Strand 4
B
1133 1139parallel
Strand 5
B
997 1000parallel
Strand 6
B
1155 1158parallel
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There are 10 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1269 1273first strand
Strand 2
B
1257 1263anti-parallel
Strand 3
B
1472 1474anti-parallel
Strand 4
B
1462 1465anti-parallel
Strand 5
B
1434 1436anti-parallel
Strand 6
B
1280 1283parallel
Strand 7
B
1406 1412parallel
Strand 8
B
1372 1376parallel
Strand 9
B
1309 1312parallel
Strand 10
B
1329 1331parallel
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