Analysis of interatomic Contacts of Structural Units in PDB entry:
5FV4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FV4 entry

There are 3 chains in PDB entry 5FV4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 5LYS 534
B
 SER 5LYS 534
C
 SER 5MET 243
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are156 helices in PDB entry 5FV4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
43 47Right-handed 310
Helix 2
2
A
73 85Right-handed alpha
Helix 3
3
A
131 135Right-handed 310
Helix 4
4
A
137 145Right-handed alpha
Helix 5
5
A
155 161Right-handed alpha
Helix 6
6
A
171 188Right-handed alpha
Helix 7
7
A
189 191Right-handed 310
Helix 8
8
A
204 216Right-handed alpha
Helix 9
9
A
217 220Right-handed 310
Helix 10
10
A
234 237Right-handed 310
Helix 11
11
A
243 255Right-handed alpha
Helix 12
12
A
260 271Right-handed alpha
Helix 13
13
A
272 284Right-handed alpha
Helix 14
14
A
293 297Right-handed 310
Helix 15
15
A
313 321Right-handed alpha
Helix 16
16
A
339 345Right-handed alpha
Helix 17
17
A
355 366Right-handed alpha
Helix 18
18
A
366 371Right-handed alpha
Helix 19
19
A
373 375Right-handed 310
Helix 20
20
A
376 386Right-handed alpha
Helix 21
21
A
390 407Right-handed alpha
Helix 22
22
A
407 421Right-handed alpha
Helix 23
23
A
450 457Right-handed alpha
Helix 24
24
A
458 462Right-handed 310
Helix 25
25
A
467 488Right-handed alpha
Helix 26
26
A
521 532Right-handed alpha
Helix 27
27
B
43 47Right-handed 310
Helix 28
28
B
73 85Right-handed alpha
Helix 29
29
B
131 135Right-handed 310
Helix 30
30
B
137 145Right-handed alpha
Helix 31
31
B
155 161Right-handed alpha
Helix 32
32
B
171 188Right-handed alpha
Helix 33
33
B
189 191Right-handed 310
Helix 34
34
B
204 216Right-handed alpha
Helix 35
35
B
217 220Right-handed 310
Helix 36
36
B
234 237Right-handed 310
Helix 37
37
B
243 255Right-handed alpha
Helix 38
38
B
260 271Right-handed alpha
Helix 39
39
B
272 284Right-handed alpha
Helix 40
40
B
293 297Right-handed 310
Helix 41
41
B
313 321Right-handed alpha
Helix 42
42
B
339 346Right-handed alpha
Helix 43
43
B
355 366Right-handed alpha
Helix 44
44
B
366 371Right-handed alpha
Helix 45
45
B
373 375Right-handed 310
Helix 46
46
B
376 386Right-handed alpha
Helix 47
47
B
390 407Right-handed alpha
Helix 48
48
B
407 421Right-handed alpha
Helix 49
49
B
450 457Right-handed alpha
Helix 50
50
B
458 462Right-handed 310
Helix 51
51
B
467 488Right-handed alpha
Helix 52
52
B
521 532Right-handed alpha
Helix 53
53
C
43 47Right-handed 310
Helix 54
54
C
73 85Right-handed alpha
Helix 55
55
C
131 135Right-handed 310
Helix 56
56
C
137 145Right-handed alpha
Helix 57
57
C
155 161Right-handed alpha
Helix 58
58
C
171 188Right-handed alpha
Helix 59
59
C
189 191Right-handed 310
Helix 60
60
C
204 216Right-handed alpha
Helix 61
61
C
217 220Right-handed 310
Helix 62
62
C
234 237Right-handed 310
Helix 63
63
C
243 255Right-handed alpha
Helix 64
64
C
260 271Right-handed alpha
Helix 65
65
C
272 284Right-handed alpha
Helix 66
66
C
293 297Right-handed 310
Helix 67
67
C
313 321Right-handed alpha
Helix 68
68
C
339 345Right-handed alpha
Helix 69
69
C
355 366Right-handed alpha
Helix 70
70
C
366 371Right-handed alpha
Helix 71
71
C
373 375Right-handed 310
Helix 72
72
C
376 386Right-handed alpha
Helix 73
73
C
390 407Right-handed alpha
Helix 74
74
C
407 421Right-handed alpha
Helix 75
75
C
450 457Right-handed alpha
Helix 76
76
C
458 462Right-handed 310
Helix 77
77
C
467 488Right-handed alpha
Helix 78
78
C
521 532Right-handed alpha
Helix 79
79
D
43 47Right-handed 310
Helix 80
80
D
73 85Right-handed alpha
Helix 81
81
D
131 135Right-handed 310
Helix 82
82
D
137 145Right-handed alpha
Helix 83
83
D
155 161Right-handed alpha
Helix 84
84
D
171 188Right-handed alpha
Helix 85
85
D
189 191Right-handed 310
Helix 86
86
D
204 216Right-handed alpha
Helix 87
87
D
217 220Right-handed 310
Helix 88
88
D
234 237Right-handed 310
Helix 89
89
D
243 255Right-handed alpha
Helix 90
90
D
260 271Right-handed alpha
Helix 91
91
D
272 284Right-handed alpha
Helix 92
92
D
293 297Right-handed 310
Helix 93
93
D
313 321Right-handed alpha
Helix 94
94
D
339 345Right-handed alpha
Helix 95
95
D
355 366Right-handed alpha
Helix 96
96
D
366 371Right-handed alpha
Helix 97
97
D
373 375Right-handed 310
Helix 98
98
D
376 386Right-handed alpha
Helix 99
99
D
390 407Right-handed alpha
Helix 100
100
D
407 421Right-handed alpha
Helix 101
101
D
450 457Right-handed alpha
Helix 102
102
D
458 462Right-handed 310
Helix 103
103
D
467 488Right-handed alpha
Helix 104
104
D
521 532Right-handed alpha
Helix 105
105
E
43 47Right-handed 310
Helix 106
106
E
73 85Right-handed alpha
Helix 107
107
E
131 135Right-handed 310
Helix 108
108
E
137 145Right-handed alpha
Helix 109
109
E
155 161Right-handed alpha
Helix 110
110
E
171 188Right-handed alpha
Helix 111
111
E
189 191Right-handed 310
Helix 112
112
E
204 216Right-handed alpha
Helix 113
113
E
217 220Right-handed 310
Helix 114
114
E
234 237Right-handed 310
Helix 115
115
E
243 255Right-handed alpha
Helix 116
116
E
260 271Right-handed alpha
Helix 117
117
E
272 284Right-handed alpha
Helix 118
118
E
293 297Right-handed 310
Helix 119
119
E
313 321Right-handed alpha
Helix 120
120
E
339 345Right-handed alpha
Helix 121
121
E
355 366Right-handed alpha
Helix 122
122
E
366 371Right-handed alpha
Helix 123
123
E
373 375Right-handed 310
Helix 124
124
E
376 386Right-handed alpha
Helix 125
125
E
390 407Right-handed alpha
Helix 126
126
E
407 421Right-handed alpha
Helix 127
127
E
450 457Right-handed alpha
Helix 128
128
E
458 462Right-handed 310
Helix 129
129
E
467 488Right-handed alpha
Helix 130
130
E
521 532Right-handed alpha
Helix 131
131
F
43 47Right-handed 310
Helix 132
132
F
73 85Right-handed alpha
Helix 133
133
F
131 135Right-handed 310
Helix 134
134
F
137 145Right-handed alpha
Helix 135
135
F
155 161Right-handed alpha
Helix 136
136
F
171 188Right-handed alpha
Helix 137
137
F
189 191Right-handed 310
Helix 138
138
F
204 216Right-handed alpha
Helix 139
139
F
217 220Right-handed 310
Helix 140
140
F
234 237Right-handed 310
Helix 141
141
F
243 255Right-handed alpha
Helix 142
142
F
260 271Right-handed alpha
Helix 143
143
F
272 284Right-handed alpha
Helix 144
144
F
293 297Right-handed 310
Helix 145
145
F
313 321Right-handed alpha
Helix 146
146
F
339 345Right-handed alpha
Helix 147
147
F
355 366Right-handed alpha
Helix 148
148
F
366 371Right-handed alpha
Helix 149
149
F
373 375Right-handed 310
Helix 150
150
F
376 386Right-handed alpha
Helix 151
151
F
390 407Right-handed alpha
Helix 152
152
F
407 421Right-handed alpha
Helix 153
153
F
450 457Right-handed alpha
Helix 154
154
F
458 463Right-handed alpha
Helix 155
155
F
467 488Right-handed alpha
Helix 156
156
F
521 532Right-handed alpha
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There are 24 sheets in PDB entry 5FV4. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, BB, BC, BD, CA, CB, CC, CD, A, DB, C, DD, EA, EB, EC, ED, FA, FB, FC, FD,

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 9first strand
Strand 2
A
15 17anti-parallel
Strand 3
A
60 62parallel
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There are 11 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 22first strand
Strand 2
A
29 37anti-parallel
Strand 3
A
101 106anti-parallel
Strand 4
A
147 151anti-parallel
Strand 5
A
116 122parallel
Strand 6
A
193 203parallel
Strand 7
A
225 229parallel
Strand 8
A
328 333parallel
Strand 9
A
425 431parallel
Strand 10
A
506 511parallel
Strand 11
A
515 518anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 70first strand
Strand 2
A
95 96parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
239 240first strand
Strand 2
A
303 304parallel
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There are 3 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
8 9first strand
Strand 2
B
15 17anti-parallel
Strand 3
B
60 62parallel
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There are 11 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
19 22first strand
Strand 2
B
29 37anti-parallel
Strand 3
B
101 106anti-parallel
Strand 4
B
147 151anti-parallel
Strand 5
B
116 122parallel
Strand 6
B
193 203parallel
Strand 7
B
225 229parallel
Strand 8
B
328 333parallel
Strand 9
B
425 431parallel
Strand 10
B
506 511parallel
Strand 11
B
515 518anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
69 70first strand
Strand 2
B
95 96parallel
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There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
239 240first strand
Strand 2
B
303 304parallel
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There are 3 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
8 9first strand
Strand 2
C
15 17anti-parallel
Strand 3
C
60 62parallel
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There are 11 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
19 22first strand
Strand 2
C
29 37anti-parallel
Strand 3
C
101 106anti-parallel
Strand 4
C
147 151anti-parallel
Strand 5
C
116 122parallel
Strand 6
C
193 203parallel
Strand 7
C
225 229parallel
Strand 8
C
328 333parallel
Strand 9
C
425 431parallel
Strand 10
C
506 511parallel
Strand 11
C
515 518anti-parallel
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There are 2 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
69 70first strand
Strand 2
C
95 96parallel
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There are 2 strands in CD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
239 240first strand
Strand 2
C
303 304parallel
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There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
8 9first strand
Strand 2
D
15 17anti-parallel
Strand 3
D
60 62parallel
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There are 11 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
19 22first strand
Strand 2
D
29 37anti-parallel
Strand 3
D
101 106anti-parallel
Strand 4
D
147 151anti-parallel
Strand 5
D
116 122parallel
Strand 6
D
193 203parallel
Strand 7
D
225 229parallel
Strand 8
D
328 333parallel
Strand 9
D
425 431parallel
Strand 10
D
506 511parallel
Strand 11
D
515 518anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
69 70first strand
Strand 2
D
95 96parallel
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There are 2 strands in DD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
239 240first strand
Strand 2
D
303 304parallel
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There are 3 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
8 9first strand
Strand 2
E
15 17anti-parallel
Strand 3
E
60 62parallel
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There are 11 strands in EB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
19 22first strand
Strand 2
E
29 37anti-parallel
Strand 3
E
101 106anti-parallel
Strand 4
E
147 151anti-parallel
Strand 5
E
116 122parallel
Strand 6
E
193 203parallel
Strand 7
E
225 229parallel
Strand 8
E
328 333parallel
Strand 9
E
425 431parallel
Strand 10
E
506 511parallel
Strand 11
E
515 518anti-parallel
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There are 2 strands in EC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
69 70first strand
Strand 2
E
95 96parallel
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There are 2 strands in ED sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
239 240first strand
Strand 2
E
303 304parallel
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There are 3 strands in FA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
8 9first strand
Strand 2
F
15 17anti-parallel
Strand 3
F
60 62parallel
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There are 11 strands in FB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
19 22first strand
Strand 2
F
29 37anti-parallel
Strand 3
F
101 106anti-parallel
Strand 4
F
147 151anti-parallel
Strand 5
F
116 122parallel
Strand 6
F
193 203parallel
Strand 7
F
225 229parallel
Strand 8
F
328 333parallel
Strand 9
F
425 431parallel
Strand 10
F
506 511parallel
Strand 11
F
515 518anti-parallel
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There are 2 strands in FC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
69 70first strand
Strand 2
F
95 96parallel
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There are 2 strands in FD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
239 240first strand
Strand 2
F
303 304parallel
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