Analysis of interatomic Contacts of Structural Units in PDB entry:
5FVC

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5FVC entry

There are 4 chains in PDB entry 5FVC (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 3	ASN 362
B	LEU 3	LEU 383
C	LEU 3	SER 361
D	SER 2	SER 242

There are214 helices in PDB entry 5FVC. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	9	18	Right-handed alpha
Helix 2	2	A	37	39	Right-handed 310
Helix 3	3	A	40	54	Right-handed alpha
Helix 4	4	A	61	75	Right-handed alpha
Helix 5	5	A	77	86	Right-handed alpha
Helix 6	6	A	120	142	Right-handed alpha
Helix 7	7	A	147	151	Right-handed 310
Helix 8	8	A	156	171	Right-handed alpha
Helix 9	9	A	175	191	Right-handed alpha
Helix 10	10	A	191	198	Right-handed alpha
Helix 11	11	A	202	217	Right-handed alpha
Helix 12	12	A	218	234	Right-handed alpha
Helix 13	13	A	238	250	Right-handed alpha
Helix 14	14	A	256	268	Right-handed alpha
Helix 15	15	A	270	274	Right-handed 310
Helix 16	16	A	275	280	Right-handed alpha
Helix 17	17	A	281	296	Right-handed alpha
Helix 18	18	A	299	303	Right-handed 310
Helix 19	19	A	318	332	Right-handed alpha
Helix 20	20	A	344	361	Right-handed alpha
Helix 21	21	B	9	18	Right-handed alpha
Helix 22	22	B	37	39	Right-handed 310
Helix 23	23	B	40	54	Right-handed alpha
Helix 24	24	B	61	75	Right-handed alpha
Helix 25	25	B	77	86	Right-handed alpha
Helix 26	26	B	120	142	Right-handed alpha
Helix 27	27	B	147	151	Right-handed 310
Helix 28	28	B	156	171	Right-handed alpha
Helix 29	29	B	175	191	Right-handed alpha
Helix 30	30	B	191	198	Right-handed alpha
Helix 31	31	B	202	217	Right-handed alpha
Helix 32	32	B	218	234	Right-handed alpha
Helix 33	33	B	238	250	Right-handed alpha
Helix 34	34	B	256	268	Right-handed alpha
Helix 35	35	B	270	274	Right-handed 310
Helix 36	36	B	275	280	Right-handed alpha
Helix 37	37	B	281	296	Right-handed alpha
Helix 38	38	B	299	303	Right-handed 310
Helix 39	39	B	318	332	Right-handed alpha
Helix 40	40	B	344	361	Right-handed alpha
Helix 41	41	B	365	370	Right-handed alpha
Helix 42	42	B	374	381	Right-handed alpha
Helix 43	43	C	9	18	Right-handed alpha
Helix 44	44	C	37	39	Right-handed 310
Helix 45	45	C	40	54	Right-handed alpha
Helix 46	46	C	61	75	Right-handed alpha
Helix 47	47	C	77	86	Right-handed alpha
Helix 48	48	C	120	142	Right-handed alpha
Helix 49	49	C	147	151	Right-handed 310
Helix 50	50	C	156	171	Right-handed alpha
Helix 51	51	C	175	191	Right-handed alpha
Helix 52	52	C	191	198	Right-handed alpha
Helix 53	53	C	202	217	Right-handed alpha
Helix 54	54	C	218	234	Right-handed alpha
Helix 55	55	C	238	250	Right-handed alpha
Helix 56	56	C	256	268	Right-handed alpha
Helix 57	57	C	270	274	Right-handed 310
Helix 58	58	C	275	280	Right-handed alpha
Helix 59	59	C	281	296	Right-handed alpha
Helix 60	60	C	299	303	Right-handed 310
Helix 61	61	C	318	332	Right-handed alpha
Helix 62	62	C	344	361	Right-handed alpha
Helix 63	63	D	9	18	Right-handed alpha
Helix 64	64	D	37	39	Right-handed 310
Helix 65	65	D	40	54	Right-handed alpha
Helix 66	66	D	61	75	Right-handed alpha
Helix 67	67	D	77	86	Right-handed alpha
Helix 68	68	D	120	142	Right-handed alpha
Helix 69	69	D	147	151	Right-handed 310
Helix 70	70	D	156	171	Right-handed alpha
Helix 71	71	D	175	191	Right-handed alpha
Helix 72	72	D	191	198	Right-handed alpha
Helix 73	73	D	202	217	Right-handed alpha
Helix 74	74	D	218	234	Right-handed alpha
Helix 75	75	D	238	250	Right-handed alpha
Helix 76	76	D	256	268	Right-handed alpha
Helix 77	77	D	270	274	Right-handed 310
Helix 78	78	D	275	280	Right-handed alpha
Helix 79	79	D	281	296	Right-handed alpha
Helix 80	80	D	299	303	Right-handed 310
Helix 81	81	D	318	332	Right-handed alpha
Helix 82	82	D	344	361	Right-handed alpha
Helix 83	83	D	365	370	Right-handed alpha
Helix 84	84	D	374	381	Right-handed alpha
Helix 85	85	E	9	18	Right-handed alpha
Helix 86	86	E	37	39	Right-handed 310
Helix 87	87	E	40	54	Right-handed alpha
Helix 88	88	E	61	75	Right-handed alpha
Helix 89	89	E	77	86	Right-handed alpha
Helix 90	90	E	120	142	Right-handed alpha
Helix 91	91	E	147	151	Right-handed 310
Helix 92	92	E	156	171	Right-handed alpha
Helix 93	93	E	175	191	Right-handed alpha
Helix 94	94	E	191	198	Right-handed alpha
Helix 95	95	E	202	217	Right-handed alpha
Helix 96	96	E	218	234	Right-handed alpha
Helix 97	97	E	238	250	Right-handed alpha
Helix 98	98	E	256	268	Right-handed alpha
Helix 99	99	E	270	274	Right-handed 310
Helix 100	100	E	275	280	Right-handed alpha
Helix 101	101	E	281	296	Right-handed alpha
Helix 102	102	E	299	303	Right-handed 310
Helix 103	103	E	318	332	Right-handed alpha
Helix 104	104	E	344	361	Right-handed alpha
Helix 105	105	E	365	370	Right-handed alpha
Helix 106	106	E	374	381	Right-handed alpha
Helix 107	107	F	9	18	Right-handed alpha
Helix 108	108	F	37	39	Right-handed 310
Helix 109	109	F	40	54	Right-handed alpha
Helix 110	110	F	61	75	Right-handed alpha
Helix 111	111	F	77	86	Right-handed alpha
Helix 112	112	F	120	142	Right-handed alpha
Helix 113	113	F	147	151	Right-handed 310
Helix 114	114	F	156	171	Right-handed alpha
Helix 115	115	F	175	191	Right-handed alpha
Helix 116	116	F	191	198	Right-handed alpha
Helix 117	117	F	202	217	Right-handed alpha
Helix 118	118	F	218	234	Right-handed alpha
Helix 119	119	F	238	250	Right-handed alpha
Helix 120	120	F	256	268	Right-handed alpha
Helix 121	121	F	270	274	Right-handed 310
Helix 122	122	F	275	280	Right-handed alpha
Helix 123	123	F	281	296	Right-handed alpha
Helix 124	124	F	299	303	Right-handed 310
Helix 125	125	F	318	332	Right-handed alpha
Helix 126	126	F	344	361	Right-handed alpha
Helix 127	127	F	365	370	Right-handed alpha
Helix 128	128	F	374	381	Right-handed alpha
Helix 129	129	G	9	18	Right-handed alpha
Helix 130	130	G	37	39	Right-handed 310
Helix 131	131	G	40	54	Right-handed alpha
Helix 132	132	G	61	75	Right-handed alpha
Helix 133	133	G	77	86	Right-handed alpha
Helix 134	134	G	120	142	Right-handed alpha
Helix 135	135	G	147	151	Right-handed 310
Helix 136	136	G	156	171	Right-handed alpha
Helix 137	137	G	175	191	Right-handed alpha
Helix 138	138	G	191	198	Right-handed alpha
Helix 139	139	G	202	217	Right-handed alpha
Helix 140	140	G	218	234	Right-handed alpha
Helix 141	141	G	238	250	Right-handed alpha
Helix 142	142	G	256	268	Right-handed alpha
Helix 143	143	G	270	274	Right-handed 310
Helix 144	144	G	275	280	Right-handed alpha
Helix 145	145	G	281	296	Right-handed alpha
Helix 146	146	G	299	303	Right-handed 310
Helix 147	147	G	318	332	Right-handed alpha
Helix 148	148	G	344	361	Right-handed alpha
Helix 149	149	G	365	370	Right-handed alpha
Helix 150	150	G	374	381	Right-handed alpha
Helix 151	151	H	9	18	Right-handed alpha
Helix 152	152	H	37	39	Right-handed 310
Helix 153	153	H	40	54	Right-handed alpha
Helix 154	154	H	61	75	Right-handed alpha
Helix 155	155	H	77	86	Right-handed alpha
Helix 156	156	H	120	142	Right-handed alpha
Helix 157	157	H	147	151	Right-handed 310
Helix 158	158	H	156	171	Right-handed alpha
Helix 159	159	H	175	191	Right-handed alpha
Helix 160	160	H	191	198	Right-handed alpha
Helix 161	161	H	202	217	Right-handed alpha
Helix 162	162	H	218	234	Right-handed alpha
Helix 163	163	H	238	250	Right-handed alpha
Helix 164	164	H	256	268	Right-handed alpha
Helix 165	165	H	270	274	Right-handed 310
Helix 166	166	H	275	280	Right-handed alpha
Helix 167	167	H	281	296	Right-handed alpha
Helix 168	168	H	299	303	Right-handed 310
Helix 169	169	H	318	332	Right-handed alpha
Helix 170	170	H	344	361	Right-handed alpha
Helix 171	171	I	9	18	Right-handed alpha
Helix 172	172	I	37	39	Right-handed 310
Helix 173	173	I	40	54	Right-handed alpha
Helix 174	174	I	61	75	Right-handed alpha
Helix 175	175	I	77	86	Right-handed alpha
Helix 176	176	I	120	142	Right-handed alpha
Helix 177	177	I	147	151	Right-handed 310
Helix 178	178	I	156	171	Right-handed alpha
Helix 179	179	I	175	191	Right-handed alpha
Helix 180	180	I	191	198	Right-handed alpha
Helix 181	181	I	202	217	Right-handed alpha
Helix 182	182	I	218	234	Right-handed alpha
Helix 183	183	I	238	250	Right-handed alpha
Helix 184	184	I	256	268	Right-handed alpha
Helix 185	185	I	270	274	Right-handed 310
Helix 186	186	I	275	280	Right-handed alpha
Helix 187	187	I	281	296	Right-handed alpha
Helix 188	188	I	299	303	Right-handed 310
Helix 189	189	I	318	332	Right-handed alpha
Helix 190	190	I	344	361	Right-handed alpha
Helix 191	191	I	365	370	Right-handed alpha
Helix 192	192	I	374	380	Right-handed alpha
Helix 193	193	J	9	18	Right-handed alpha
Helix 194	194	J	37	39	Right-handed 310
Helix 195	195	J	40	54	Right-handed alpha
Helix 196	196	J	61	75	Right-handed alpha
Helix 197	197	J	77	86	Right-handed alpha
Helix 198	198	J	120	139	Right-handed alpha
Helix 199	199	J	147	151	Right-handed 310
Helix 200	200	J	156	171	Right-handed alpha
Helix 201	201	J	175	191	Right-handed alpha
Helix 202	202	J	191	198	Right-handed alpha
Helix 203	203	J	202	217	Right-handed alpha
Helix 204	204	J	218	234	Right-handed alpha
Helix 205	205	J	238	250	Right-handed alpha
Helix 206	206	J	256	268	Right-handed alpha
Helix 207	207	J	270	274	Right-handed 310
Helix 208	208	J	275	280	Right-handed alpha
Helix 209	209	J	281	296	Right-handed alpha
Helix 210	210	J	299	303	Right-handed 310
Helix 211	211	J	318	332	Right-handed alpha
Helix 212	212	J	344	361	Right-handed alpha
Helix 213	213	J	365	370	Right-handed alpha
Helix 214	214	J	374	381	Right-handed alpha

There are 17 sheets in PDB entry 5FVC. Click on sheet of interest to get list of strands forming it: AA, BA, BB, CA, CB, A, DB, EA, FA, GA, GB, HA, HB, IA, IB, JA, JB,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	32	35	first strand
Strand 2	A	91	94	parallel

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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	32	35	first strand
Strand 2	B	91	94	parallel

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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	96	97	first strand
Strand 2	B	114	115	anti-parallel

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There are 2 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	32	35	first strand
Strand 2	C	91	94	parallel

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There are 2 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	96	97	first strand
Strand 2	C	114	115	anti-parallel

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There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	32	35	first strand
Strand 2	D	91	94	parallel

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There are 2 strands in DB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	96	97	first strand
Strand 2	D	114	115	anti-parallel

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There are 2 strands in EA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	32	35	first strand
Strand 2	E	91	94	parallel

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There are 2 strands in FA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	32	35	first strand
Strand 2	F	91	94	parallel

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There are 2 strands in GA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	32	35	first strand
Strand 2	G	91	94	parallel

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There are 2 strands in GB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	96	98	first strand
Strand 2	G	113	115	anti-parallel

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There are 2 strands in HA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	32	35	first strand
Strand 2	H	91	94	parallel

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There are 2 strands in HB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	96	98	first strand
Strand 2	H	113	115	anti-parallel

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There are 2 strands in IA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	32	35	first strand
Strand 2	I	91	94	parallel

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There are 2 strands in IB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	96	98	first strand
Strand 2	I	113	115	anti-parallel

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There are 2 strands in JA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	32	35	first strand
Strand 2	J	91	94	parallel

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There are 2 strands in JB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	96	98	first strand
Strand 2	J	113	115	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5FVC

Analysis of interatomic Contacts of Structural Units in PDB entry:
5FVC