Analysis of interatomic Contacts of Structural Units in PDB entry:
5FW4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FW4 entry

There are 2 chains in PDB entry 5FW4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 10GLY 391
B
 ALA 10GLY 391
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 5FW4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 23Right-handed alpha
Helix 2
2
A
51 56Right-handed alpha
Helix 3
3
A
57 82Right-handed alpha
Helix 4
4
A
83 88Right-handed alpha
Helix 5
5
A
108 115Right-handed alpha
Helix 6
6
A
117 121Right-handed 310
Helix 7
7
A
122 126Right-handed 310
Helix 8
8
A
137 140Right-handed 310
Helix 9
9
A
153 167Right-handed alpha
Helix 10
10
A
184 188Right-handed 310
Helix 11
11
A
212 220Right-handed alpha
Helix 12
12
A
229 233Right-handed 310
Helix 13
13
A
246 253Right-handed alpha
Helix 14
14
A
254 263Right-handed alpha
Helix 15
15
A
298 304Right-handed alpha
Helix 16
16
A
305 309Right-handed 310
Helix 17
17
A
326 328Right-handed 310
Helix 18
18
A
342 345Right-handed 310
Helix 19
19
A
346 357Right-handed alpha
Helix 20
20
A
361 363Right-handed 310
Helix 21
21
A
385 390Right-handed alpha
Helix 22
22
B
11 23Right-handed alpha
Helix 23
23
B
51 56Right-handed alpha
Helix 24
24
B
57 82Right-handed alpha
Helix 25
25
B
83 88Right-handed alpha
Helix 26
26
B
109 115Right-handed alpha
Helix 27
27
B
117 121Right-handed 310
Helix 28
28
B
122 126Right-handed 310
Helix 29
29
B
137 140Right-handed 310
Helix 30
30
B
153 168Right-handed alpha
Helix 31
31
B
184 188Right-handed 310
Helix 32
32
B
212 220Right-handed alpha
Helix 33
33
B
226 233Right-handed 310
Helix 34
34
B
246 251Right-handed alpha
Helix 35
35
B
254 263Right-handed alpha
Helix 36
36
B
298 304Right-handed alpha
Helix 37
37
B
305 309Right-handed 310
Helix 38
38
B
326 328Right-handed 310
Helix 39
39
B
342 345Right-handed 310
Helix 40
40
B
346 357Right-handed alpha
Helix 41
41
B
359 363Right-handed 310
Helix 42
42
B
385 390Right-handed alpha
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There are 6 sheets in PDB entry 5FW4. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, BA,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
102 107first strand
Strand 2
A
145 151anti-parallel
Strand 3
A
42 50anti-parallel
Strand 4
A
172 181anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
314 315first strand
Strand 2
A
330 340anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
318 324first strand
Strand 2
A
330 340parallel
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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
365 375first strand
Strand 2
A
236 245anti-parallel
Strand 3
A
330 340anti-parallel
Strand 4
A
318 324parallel
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There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
365 375first strand
Strand 2
A
236 245anti-parallel
Strand 3
A
330 340anti-parallel
Strand 4
A
314 315anti-parallel
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There are 9 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
42 50first strand
Strand 2
B
145 151anti-parallel
Strand 3
B
102 108anti-parallel
Strand 4
B
365 375anti-parallel
Strand 5
B
236 245anti-parallel
Strand 6
B
330 340anti-parallel
Strand 7
B
318 324anti-parallel
Strand 8
B
172 181anti-parallel
Strand 9
B
42 50first strand
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