Analysis of interatomic Contacts of Structural Units in PDB entry:
5FWJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FWJ entry

There are 2 chains in PDB entry 5FWJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 6SER 769
B
 SER 6SER 769
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 5FWJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 25Right-handed alpha
Helix 2
2
A
26 39Right-handed alpha
Helix 3
3
A
59 62Right-handed 310
Helix 4
4
A
394 410Right-handed alpha
Helix 5
5
A
417 430Right-handed alpha
Helix 6
6
A
446 450Right-handed alpha
Helix 7
7
A
463 472Right-handed alpha
Helix 8
8
A
478 482Right-handed 310
Helix 9
9
A
485 490Right-handed 310
Helix 10
10
A
516 520Right-handed 310
Helix 11
11
A
538 540Right-handed 310
Helix 12
12
A
541 553Right-handed alpha
Helix 13
13
A
572 578Right-handed alpha
Helix 14
14
A
619 621Right-handed 310
Helix 15
15
A
622 637Right-handed alpha
Helix 16
16
A
643 653Right-handed alpha
Helix 17
17
A
654 658Right-handed 310
Helix 18
18
A
659 688Right-handed alpha
Helix 19
19
A
696 700Right-handed 310
Helix 20
20
A
701 705Right-handed 310
Helix 21
21
A
730 734Right-handed 310
Helix 22
22
A
741 743Right-handed 310
Helix 23
23
A
754 768Right-handed alpha
Helix 24
24
B
20 25Right-handed alpha
Helix 25
25
B
26 39Right-handed alpha
Helix 26
26
B
59 62Right-handed 310
Helix 27
27
B
394 410Right-handed alpha
Helix 28
28
B
417 430Right-handed alpha
Helix 29
29
B
446 450Right-handed alpha
Helix 30
30
B
463 472Right-handed alpha
Helix 31
31
B
478 482Right-handed 310
Helix 32
32
B
485 490Right-handed 310
Helix 33
33
B
516 520Right-handed 310
Helix 34
34
B
538 540Right-handed 310
Helix 35
35
B
541 553Right-handed alpha
Helix 36
36
B
572 578Right-handed alpha
Helix 37
37
B
619 621Right-handed 310
Helix 38
38
B
622 637Right-handed alpha
Helix 39
39
B
643 653Right-handed alpha
Helix 40
40
B
654 658Right-handed 310
Helix 41
41
B
659 688Right-handed alpha
Helix 42
42
B
696 700Right-handed 310
Helix 43
43
B
701 705Right-handed 310
Helix 44
44
B
730 734Right-handed 310
Helix 45
45
B
741 743Right-handed 310
Helix 46
46
B
754 768Right-handed alpha
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There are 8 sheets in PDB entry 5FWJ. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, BB, BC, BD,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 17first strand
Strand 2
A
43 46parallel
Strand 3
A
593 596anti-parallel
Strand 4
A
521 529anti-parallel
Strand 5
A
610 617anti-parallel
Strand 6
A
501 505anti-parallel
Strand 7
A
437 445anti-parallel
Strand 8
A
68 71anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 65first strand
Strand 2
A
392 393anti-parallel
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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
510 514first strand
Strand 2
A
602 606anti-parallel
Strand 3
A
532 536anti-parallel
Strand 4
A
584 588anti-parallel
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There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
692 694first strand
Strand 2
A
745 749parallel
Strand 3
A
717 721anti-parallel
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There are 8 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
16 17first strand
Strand 2
B
43 46parallel
Strand 3
B
593 596anti-parallel
Strand 4
B
521 529anti-parallel
Strand 5
B
610 617anti-parallel
Strand 6
B
501 505anti-parallel
Strand 7
B
437 445anti-parallel
Strand 8
B
68 71anti-parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
64 65first strand
Strand 2
B
392 393anti-parallel
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There are 4 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
510 514first strand
Strand 2
B
602 606anti-parallel
Strand 3
B
532 536anti-parallel
Strand 4
B
584 588anti-parallel
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There are 3 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
691 694first strand
Strand 2
B
745 749parallel
Strand 3
B
717 721anti-parallel
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