Analysis of interatomic Contacts of Structural Units in PDB entry:
5FXH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5FXH entry

There are 4 chains in PDB entry 5FXH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 25	ALA 864
B	PRO 32	LEU 841
C	LYS 25	LYS 862
D	PRO 32	LEU 841

There are107 helices in PDB entry 5FXH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	35	52	Right-handed alpha
Helix 2	2	A	70	86	Right-handed alpha
Helix 3	3	A	105	114	Right-handed alpha
Helix 4	4	A	143	148	Right-handed alpha
Helix 5	5	A	148	159	Right-handed alpha
Helix 6	6	A	170	191	Right-handed alpha
Helix 7	7	A	224	226	Right-handed 310
Helix 8	8	A	227	232	Right-handed alpha
Helix 9	9	A	233	235	Right-handed 310
Helix 10	10	A	245	257	Right-handed alpha
Helix 11	11	A	271	276	Right-handed alpha
Helix 12	12	A	277	281	Right-handed 310
Helix 13	13	A	297	318	Right-handed alpha
Helix 14	14	A	337	349	Right-handed alpha
Helix 15	15	A	478	491	Right-handed alpha
Helix 16	16	A	520	528	Right-handed alpha
Helix 17	17	A	541	548	Right-handed alpha
Helix 18	18	A	582	604	Right-handed alpha
Helix 19	19	A	626	637	Right-handed alpha
Helix 20	20	A	647	677	Right-handed alpha
Helix 21	21	A	690	695	Right-handed alpha
Helix 22	22	A	708	716	Right-handed alpha
Helix 23	23	A	720	731	Right-handed alpha
Helix 24	24	A	734	744	Right-handed alpha
Helix 25	25	A	754	764	Right-handed alpha
Helix 26	26	A	789	803	Right-handed alpha
Helix 27	27	A	804	813	Right-handed alpha
Helix 28	28	A	830	863	Right-handed alpha
Helix 29	29	B	46	57	Right-handed alpha
Helix 30	30	B	77	92	Right-handed alpha
Helix 31	31	B	105	120	Right-handed alpha
Helix 32	32	B	127	132	Right-handed alpha
Helix 33	33	B	149	165	Right-handed alpha
Helix 34	34	B	178	192	Right-handed alpha
Helix 35	35	B	210	213	Right-handed 310
Helix 36	36	B	214	223	Right-handed alpha
Helix 37	37	B	233	248	Right-handed alpha
Helix 38	38	B	260	264	Right-handed alpha
Helix 39	39	B	288	312	Right-handed alpha
Helix 40	40	B	326	331	Right-handed 310
Helix 41	41	B	333	341	Right-handed alpha
Helix 42	42	B	459	473	Right-handed alpha
Helix 43	43	B	496	503	Right-handed alpha
Helix 44	44	B	516	523	Right-handed alpha
Helix 45	45	B	556	576	Right-handed alpha
Helix 46	46	B	604	614	Right-handed alpha
Helix 47	47	B	625	655	Right-handed alpha
Helix 48	48	B	689	699	Right-handed alpha
Helix 49	49	B	699	706	Right-handed alpha
Helix 50	50	B	714	724	Right-handed alpha
Helix 51	51	B	733	742	Right-handed alpha
Helix 52	52	B	772	787	Right-handed alpha
Helix 53	53	B	788	796	Right-handed alpha
Helix 54	54	B	815	841	Right-handed alpha
Helix 55	55	C	35	52	Right-handed alpha
Helix 56	56	C	70	86	Right-handed alpha
Helix 57	57	C	105	114	Right-handed alpha
Helix 58	58	C	143	148	Right-handed alpha
Helix 59	59	C	148	159	Right-handed alpha
Helix 60	60	C	170	191	Right-handed alpha
Helix 61	61	C	224	226	Right-handed 310
Helix 62	62	C	227	232	Right-handed alpha
Helix 63	63	C	233	235	Right-handed 310
Helix 64	64	C	245	257	Right-handed alpha
Helix 65	65	C	271	276	Right-handed alpha
Helix 66	66	C	277	281	Right-handed 310
Helix 67	67	C	297	318	Right-handed alpha
Helix 68	68	C	337	349	Right-handed alpha
Helix 69	69	C	478	491	Right-handed alpha
Helix 70	70	C	520	528	Right-handed alpha
Helix 71	71	C	541	548	Right-handed alpha
Helix 72	72	C	582	603	Right-handed alpha
Helix 73	73	C	626	637	Right-handed alpha
Helix 74	74	C	647	677	Right-handed alpha
Helix 75	75	C	690	695	Right-handed alpha
Helix 76	76	C	708	716	Right-handed alpha
Helix 77	77	C	720	731	Right-handed alpha
Helix 78	78	C	734	744	Right-handed alpha
Helix 79	79	C	754	764	Right-handed alpha
Helix 80	80	C	789	803	Right-handed alpha
Helix 81	81	C	804	813	Right-handed alpha
Helix 82	82	C	830	862	Right-handed alpha
Helix 83	83	D	46	57	Right-handed alpha
Helix 84	84	D	77	92	Right-handed alpha
Helix 85	85	D	105	120	Right-handed alpha
Helix 86	86	D	127	132	Right-handed alpha
Helix 87	87	D	149	165	Right-handed alpha
Helix 88	88	D	178	192	Right-handed alpha
Helix 89	89	D	210	213	Right-handed 310
Helix 90	90	D	214	223	Right-handed alpha
Helix 91	91	D	233	248	Right-handed alpha
Helix 92	92	D	260	264	Right-handed alpha
Helix 93	93	D	288	312	Right-handed alpha
Helix 94	94	D	333	341	Right-handed alpha
Helix 95	95	D	459	473	Right-handed alpha
Helix 96	96	D	496	503	Right-handed alpha
Helix 97	97	D	516	523	Right-handed alpha
Helix 98	98	D	556	576	Right-handed alpha
Helix 99	99	D	604	614	Right-handed alpha
Helix 100	100	D	625	655	Right-handed alpha
Helix 101	101	D	689	699	Right-handed alpha
Helix 102	102	D	699	706	Right-handed alpha
Helix 103	103	D	714	724	Right-handed alpha
Helix 104	104	D	733	742	Right-handed alpha
Helix 105	105	D	772	787	Right-handed alpha
Helix 106	106	D	788	796	Right-handed alpha
Helix 107	107	D	815	841	Right-handed alpha

There are 38 sheets in PDB entry 5FXH. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, BA, BB, BC, BD, BE, BF, CA, CB, CC, CD, CE, CF, CG, CH, CI, CJ, CK, CL, CM, A, DB, C, DD, DE, DF,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	60	62	first strand
Strand 2	A	27	33	parallel

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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	65	66	first strand
Strand 2	A	27	33	parallel

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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	118	120	first strand
Strand 2	A	90	92	parallel
Strand 3	A	27	33	parallel
Strand 4	A	65	66	parallel

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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	118	120	first strand
Strand 2	A	90	92	parallel
Strand 3	A	27	33	parallel
Strand 4	A	60	62	parallel

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There are 3 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	164	167	first strand
Strand 2	A	239	243	parallel
Strand 3	A	267	269	parallel

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There are 4 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	290	292	first strand
Strand 2	A	372	377	anti-parallel
Strand 3	A	382	388	anti-parallel
Strand 4	A	393	395	anti-parallel

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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	351	354	first strand
Strand 2	A	357	359	anti-parallel

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There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	418	423	first strand
Strand 2	A	494	499	parallel

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There are 2 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	455	459	first strand
Strand 2	A	472	476	anti-parallel

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There are 2 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	509	510	first strand
Strand 2	A	517	518	anti-parallel

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There are 4 strands in AK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	535	536	first strand
Strand 2	A	774	781	anti-parallel
Strand 3	A	555	564	anti-parallel
Strand 4	A	767	768	anti-parallel

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There are 5 strands in AL sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	535	536	first strand
Strand 2	A	774	781	anti-parallel
Strand 3	A	555	564	anti-parallel
Strand 4	A	749	753	anti-parallel
Strand 5	A	702	704	parallel

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There are 2 strands in AM sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	767	768	first strand
Strand 2	A	555	564	anti-parallel

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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	65	73	first strand
Strand 2	B	34	42	parallel
Strand 3	B	96	99	parallel
Strand 4	B	123	125	parallel
Strand 5	B	144	145	parallel

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There are 8 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	199	204	first strand
Strand 2	B	169	173	parallel
Strand 3	B	227	231	parallel
Strand 4	B	255	259	parallel
Strand 5	B	278	281	parallel
Strand 6	B	363	367	anti-parallel
Strand 7	B	373	380	anti-parallel
Strand 8	B	383	386	anti-parallel

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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	409	410	first strand
Strand 2	B	479	480	parallel

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There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	418	420	first strand
Strand 2	B	456	458	anti-parallel

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There are 2 strands in BE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	530	532	first strand
Strand 2	B	760	762	anti-parallel

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There are 4 strands in BF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	683	684	first strand
Strand 2	B	728	732	parallel
Strand 3	B	534	539	anti-parallel
Strand 4	B	748	749	anti-parallel

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There are 2 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	60	62	first strand
Strand 2	C	27	33	parallel

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There are 2 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	65	66	first strand
Strand 2	C	27	33	parallel

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There are 4 strands in CC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	118	120	first strand
Strand 2	C	90	92	parallel
Strand 3	C	27	33	parallel
Strand 4	C	65	66	parallel

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There are 4 strands in CD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	118	120	first strand
Strand 2	C	90	92	parallel
Strand 3	C	27	33	parallel
Strand 4	C	60	62	parallel

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There are 3 strands in CE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	164	167	first strand
Strand 2	C	239	243	parallel
Strand 3	C	267	269	parallel

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There are 4 strands in CF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	290	292	first strand
Strand 2	C	372	377	anti-parallel
Strand 3	C	382	388	anti-parallel
Strand 4	C	393	395	anti-parallel

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There are 2 strands in CG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	351	354	first strand
Strand 2	C	357	359	anti-parallel

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There are 2 strands in CH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	418	423	first strand
Strand 2	C	494	499	parallel

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There are 2 strands in CI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	455	459	first strand
Strand 2	C	472	476	anti-parallel

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There are 2 strands in CJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	509	510	first strand
Strand 2	C	517	518	anti-parallel

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There are 4 strands in CK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	535	536	first strand
Strand 2	C	774	781	anti-parallel
Strand 3	C	555	564	anti-parallel
Strand 4	C	767	768	anti-parallel

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There are 5 strands in CL sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	535	536	first strand
Strand 2	C	774	781	anti-parallel
Strand 3	C	555	564	anti-parallel
Strand 4	C	749	753	anti-parallel
Strand 5	C	702	704	parallel

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There are 2 strands in CM sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	767	768	first strand
Strand 2	C	555	564	anti-parallel

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There are 5 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	65	73	first strand
Strand 2	D	34	42	parallel
Strand 3	D	96	99	parallel
Strand 4	D	123	125	parallel
Strand 5	D	144	145	parallel

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There are 8 strands in DB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	199	204	first strand
Strand 2	D	169	173	parallel
Strand 3	D	227	231	parallel
Strand 4	D	255	259	parallel
Strand 5	D	278	281	parallel
Strand 6	D	363	367	anti-parallel
Strand 7	D	373	380	anti-parallel
Strand 8	D	383	386	anti-parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	409	410	first strand
Strand 2	D	479	480	parallel

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There are 2 strands in DD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	418	420	first strand
Strand 2	D	456	458	anti-parallel

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There are 2 strands in DE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	530	532	first strand
Strand 2	D	760	762	anti-parallel

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There are 4 strands in DF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	683	684	first strand
Strand 2	D	728	732	parallel
Strand 3	D	534	539	anti-parallel
Strand 4	D	748	749	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5FXH

Analysis of interatomic Contacts of Structural Units in PDB entry:
5FXH