Analysis of interatomic Contacts of Structural Units in PDB entry:
5FXJ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5FXJ entry

There are 4 chains in PDB entry 5FXJ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 25	ARG 860
B	PRO 32	GLN 845
C	LYS 25	ALA 864
D	PRO 32	ILE 837

There are108 helices in PDB entry 5FXJ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	36	49	Right-handed alpha
Helix 2	2	A	50	52	Right-handed 310
Helix 3	3	A	70	81	Right-handed alpha
Helix 4	4	A	82	86	Right-handed 310
Helix 5	5	A	105	110	Right-handed alpha
Helix 6	6	A	143	155	Right-handed alpha
Helix 7	7	A	170	186	Right-handed alpha
Helix 8	8	A	225	234	Right-handed alpha
Helix 9	9	A	245	257	Right-handed alpha
Helix 10	10	A	271	276	Right-handed alpha
Helix 11	11	A	278	283	Right-handed alpha
Helix 12	12	A	297	318	Right-handed alpha
Helix 13	13	A	338	349	Right-handed alpha
Helix 14	14	A	478	491	Right-handed alpha
Helix 15	15	A	521	528	Right-handed alpha
Helix 16	16	A	541	548	Right-handed alpha
Helix 17	17	A	580	605	Right-handed alpha
Helix 18	18	A	622	636	Right-handed alpha
Helix 19	19	A	647	677	Right-handed alpha
Helix 20	20	A	690	695	Right-handed alpha
Helix 21	21	A	710	716	Right-handed alpha
Helix 22	22	A	720	731	Right-handed alpha
Helix 23	23	A	734	744	Right-handed alpha
Helix 24	24	A	754	764	Right-handed alpha
Helix 25	25	A	789	803	Right-handed alpha
Helix 26	26	A	804	813	Right-handed alpha
Helix 27	27	A	834	860	Right-handed alpha
Helix 28	28	B	47	53	Right-handed alpha
Helix 29	29	B	80	92	Right-handed alpha
Helix 30	30	B	105	120	Right-handed alpha
Helix 31	31	B	127	132	Right-handed alpha
Helix 32	32	B	149	164	Right-handed alpha
Helix 33	33	B	178	190	Right-handed alpha
Helix 34	34	B	214	223	Right-handed alpha
Helix 35	35	B	236	248	Right-handed alpha
Helix 36	36	B	259	264	Right-handed alpha
Helix 37	37	B	288	310	Right-handed alpha
Helix 38	38	B	322	327	Right-handed alpha
Helix 39	39	B	328	330	Right-handed 310
Helix 40	40	B	335	340	Right-handed alpha
Helix 41	41	B	459	473	Right-handed alpha
Helix 42	42	B	496	503	Right-handed alpha
Helix 43	43	B	516	523	Right-handed alpha
Helix 44	44	B	551	554	Right-handed 310
Helix 45	45	B	555	578	Right-handed alpha
Helix 46	46	B	601	614	Right-handed alpha
Helix 47	47	B	625	656	Right-handed alpha
Helix 48	48	B	689	699	Right-handed alpha
Helix 49	49	B	699	706	Right-handed alpha
Helix 50	50	B	713	723	Right-handed alpha
Helix 51	51	B	733	742	Right-handed alpha
Helix 52	52	B	772	786	Right-handed alpha
Helix 53	53	B	788	796	Right-handed alpha
Helix 54	54	B	816	845	Right-handed alpha
Helix 55	55	C	36	49	Right-handed alpha
Helix 56	56	C	50	52	Right-handed 310
Helix 57	57	C	70	81	Right-handed alpha
Helix 58	58	C	82	86	Right-handed 310
Helix 59	59	C	105	110	Right-handed alpha
Helix 60	60	C	143	155	Right-handed alpha
Helix 61	61	C	170	186	Right-handed alpha
Helix 62	62	C	225	234	Right-handed alpha
Helix 63	63	C	245	257	Right-handed alpha
Helix 64	64	C	271	276	Right-handed alpha
Helix 65	65	C	278	283	Right-handed alpha
Helix 66	66	C	297	317	Right-handed alpha
Helix 67	67	C	338	349	Right-handed alpha
Helix 68	68	C	478	491	Right-handed alpha
Helix 69	69	C	521	528	Right-handed alpha
Helix 70	70	C	541	548	Right-handed alpha
Helix 71	71	C	580	605	Right-handed alpha
Helix 72	72	C	622	636	Right-handed alpha
Helix 73	73	C	647	677	Right-handed alpha
Helix 74	74	C	690	695	Right-handed alpha
Helix 75	75	C	710	716	Right-handed alpha
Helix 76	76	C	720	731	Right-handed alpha
Helix 77	77	C	734	744	Right-handed alpha
Helix 78	78	C	754	764	Right-handed alpha
Helix 79	79	C	789	803	Right-handed alpha
Helix 80	80	C	804	813	Right-handed alpha
Helix 81	81	C	834	864	Right-handed alpha
Helix 82	82	D	47	53	Right-handed alpha
Helix 83	83	D	80	92	Right-handed alpha
Helix 84	84	D	105	120	Right-handed alpha
Helix 85	85	D	127	132	Right-handed alpha
Helix 86	86	D	149	164	Right-handed alpha
Helix 87	87	D	178	190	Right-handed alpha
Helix 88	88	D	214	223	Right-handed alpha
Helix 89	89	D	236	248	Right-handed alpha
Helix 90	90	D	259	264	Right-handed alpha
Helix 91	91	D	288	310	Right-handed alpha
Helix 92	92	D	322	327	Right-handed alpha
Helix 93	93	D	328	330	Right-handed 310
Helix 94	94	D	335	340	Right-handed alpha
Helix 95	95	D	459	473	Right-handed alpha
Helix 96	96	D	496	503	Right-handed alpha
Helix 97	97	D	516	523	Right-handed alpha
Helix 98	98	D	551	554	Right-handed 310
Helix 99	99	D	555	578	Right-handed alpha
Helix 100	100	D	601	614	Right-handed alpha
Helix 101	101	D	625	656	Right-handed alpha
Helix 102	102	D	689	699	Right-handed alpha
Helix 103	103	D	699	706	Right-handed alpha
Helix 104	104	D	713	723	Right-handed alpha
Helix 105	105	D	733	742	Right-handed alpha
Helix 106	106	D	772	786	Right-handed alpha
Helix 107	107	D	788	796	Right-handed alpha
Helix 108	108	D	816	837	Right-handed alpha

There are 26 sheets in PDB entry 5FXJ. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, BA, BB, BC, BD, BE, CA, CB, CC, CD, CE, CF, CG, CH, A, DB, C, DD, DE,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	165	168	first strand
Strand 2	A	215	218	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	239	241	first strand
Strand 2	A	267	269	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	289	292	first strand
Strand 2	A	372	377	anti-parallel
Strand 3	A	382	388	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	353	354	first strand
Strand 2	A	357	358	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	419	421	first strand
Strand 2	A	495	497	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	455	459	first strand
Strand 2	A	472	476	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	555	557	first strand
Strand 2	A	777	779	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	559	561	first strand
Strand 2	A	751	753	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	168	173	first strand
Strand 2	B	198	204	parallel

Back to list of sheets
Back to top of page

There are 5 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	257	258	first strand
Strand 2	B	278	281	parallel
Strand 3	B	363	365	anti-parallel
Strand 4	B	375	379	anti-parallel
Strand 5	B	384	386	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	409	410	first strand
Strand 2	B	479	480	parallel

Back to list of sheets
Back to top of page

There are 3 strands in BD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	418	420	first strand
Strand 2	B	456	458	anti-parallel
Strand 3	B	434	435	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in BE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	728	732	first strand
Strand 2	B	530	538	anti-parallel
Strand 3	B	757	762	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	165	168	first strand
Strand 2	C	215	218	parallel

Back to list of sheets
Back to top of page

There are 2 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	239	241	first strand
Strand 2	C	267	269	parallel

Back to list of sheets
Back to top of page

There are 3 strands in CC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	289	292	first strand
Strand 2	C	372	377	anti-parallel
Strand 3	C	382	388	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in CD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	353	354	first strand
Strand 2	C	357	358	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in CE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	419	421	first strand
Strand 2	C	495	497	parallel

Back to list of sheets
Back to top of page

There are 2 strands in CF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	455	459	first strand
Strand 2	C	472	476	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in CG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	555	557	first strand
Strand 2	C	777	779	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in CH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	559	561	first strand
Strand 2	C	751	753	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	169	173	first strand
Strand 2	D	199	204	parallel

Back to list of sheets
Back to top of page

There are 5 strands in DB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	257	258	first strand
Strand 2	D	278	281	parallel
Strand 3	D	363	365	anti-parallel
Strand 4	D	375	379	anti-parallel
Strand 5	D	384	386	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	409	410	first strand
Strand 2	D	479	480	parallel

Back to list of sheets
Back to top of page

There are 3 strands in DD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	418	420	first strand
Strand 2	D	456	458	anti-parallel
Strand 3	D	434	435	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in DE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	728	732	first strand
Strand 2	D	530	538	anti-parallel
Strand 3	D	757	762	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5FXJ

Analysis of interatomic Contacts of Structural Units in PDB entry:
5FXJ