Analysis of interatomic Contacts of Structural Units in PDB entry:
5FXQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FXQ entry

There is 1 chain in PDB entry 5FXQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 979LYS 1286
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 5FXQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
995 997Right-handed 310
Helix 2
2
A
1040 1052Right-handed alpha
Helix 3
3
A
1053 1057Right-handed 310
Helix 4
4
A
1086 1093Right-handed alpha
Helix 5
5
A
1108 1129Right-handed alpha
Helix 6
6
A
1137 1139Right-handed 310
Helix 7
7
A
1161 1165Right-handed 310
Helix 8
8
A
1175 1179Right-handed 310
Helix 9
9
A
1180 1187Right-handed alpha
Helix 10
10
A
1190 1208Right-handed alpha
Helix 11
11
A
1217 1227Right-handed alpha
Helix 12
12
A
1238 1249Right-handed alpha
Helix 13
13
A
1252 1256Right-handed 310
Helix 14
14
A
1258 1267Right-handed alpha
Helix 15
15
A
1268 1270Right-handed 310
Helix 16
16
A
1273 1278Right-handed alpha
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There are 3 sheets in PDB entry 5FXQ. Click on sheet of interest to get list of strands forming it: AA, AB, AC,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
999 1007first strand
Strand 2
A
1012 1022anti-parallel
Strand 3
A
1025 1035anti-parallel
Strand 4
A
1075 1080anti-parallel
Strand 5
A
1065 1069anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1141 1143first strand
Strand 2
A
1149 1151anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1166 1167first strand
Strand 2
A
1173 1174anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il