Analysis of interatomic Contacts of Structural Units in PDB entry:
5FZM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FZM entry

There is 1 chain in PDB entry 5FZM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER -1GLU 753
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 5FZM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
38 43Right-handed alpha
Helix 2
2
A
44 57Right-handed alpha
Helix 3
3
A
379 395Right-handed alpha
Helix 4
4
A
397 401Right-handed 310
Helix 5
5
A
402 416Right-handed alpha
Helix 6
6
A
448 454Right-handed alpha
Helix 7
7
A
479 484Right-handed alpha
Helix 8
8
A
501 505Right-handed 310
Helix 9
9
A
523 525Right-handed 310
Helix 10
10
A
526 538Right-handed alpha
Helix 11
11
A
539 543Right-handed 310
Helix 12
12
A
557 564Right-handed alpha
Helix 13
13
A
604 606Right-handed 310
Helix 14
14
A
607 621Right-handed alpha
Helix 15
15
A
628 638Right-handed alpha
Helix 16
16
A
639 643Right-handed 310
Helix 17
17
A
644 671Right-handed alpha
Helix 18
18
A
681 685Right-handed 310
Helix 19
19
A
686 690Right-handed 310
Helix 20
20
A
715 722Right-handed 310
Helix 21
21
A
726 728Right-handed 310
Helix 22
22
A
737 753Right-handed alpha
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There are 5 sheets in PDB entry 5FZM. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 35first strand
Strand 2
A
61 64parallel
Strand 3
A
578 581anti-parallel
Strand 4
A
506 514anti-parallel
Strand 5
A
595 602anti-parallel
Strand 6
A
486 490anti-parallel
Strand 7
A
422 429anti-parallel
Strand 8
A
86 89anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
82 83first strand
Strand 2
A
377 378anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
96 97first strand
Strand 2
A
552 553anti-parallel
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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
495 499first strand
Strand 2
A
587 591anti-parallel
Strand 3
A
517 521anti-parallel
Strand 4
A
569 573anti-parallel
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There are 3 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
676 679first strand
Strand 2
A
730 734parallel
Strand 3
A
702 706anti-parallel
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