Analysis of interatomic Contacts of Structural Units in PDB entry:
5G0F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5G0F entry

There is 1 chain in PDB entry 5G0F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 972ASN 1081
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 5G0F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
981 985Right-handed 310
Helix 2
2
A
1025 1035Right-handed alpha
Helix 3
3
A
1058 1060Right-handed 310
Helix 4
4
A
1061 1074Right-handed alpha
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There is 1 sheet ( AA) in PDB entry 5G0F.

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1017 1019first strand
Strand 2
A
1008 1011anti-parallel
Strand 3
A
1038 1041anti-parallel
Strand 4
A
1047 1049anti-parallel
Strand 5
A
1054 1055anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il