Analysis of interatomic Contacts of Structural Units in PDB entry:
5G0G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5G0G entry

There is 1 chain in PDB entry 5G0G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 59PHE 418
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 5G0G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
68 73Right-handed 310
Helix 2
2
A
86 99Right-handed alpha
Helix 3
3
A
101 105Right-handed 310
Helix 4
4
A
114 119Right-handed alpha
Helix 5
5
A
123 133Right-handed alpha
Helix 6
6
A
134 136Right-handed 310
Helix 7
7
A
137 146Right-handed alpha
Helix 8
8
A
156 177Right-handed alpha
Helix 9
9
A
206 220Right-handed alpha
Helix 10
10
A
234 242Right-handed alpha
Helix 11
11
A
256 259Right-handed 310
Helix 12
12
A
264 268Right-handed 310
Helix 13
13
A
274 278Right-handed 310
Helix 14
14
A
292 303Right-handed alpha
Helix 15
15
A
303 312Right-handed alpha
Helix 16
16
A
338 348Right-handed alpha
Helix 17
17
A
349 353Right-handed 310
Helix 18
18
A
364 380Right-handed alpha
Helix 19
19
A
394 409Right-handed alpha
Helix 20
20
A
410 416Right-handed 310
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There is 1 sheet ( AA) in PDB entry 5G0G.

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 107first strand
Strand 2
A
63 66parallel
Strand 3
A
182 185parallel
Strand 4
A
355 359parallel
Strand 5
A
315 320parallel
Strand 6
A
224 228parallel
Strand 7
A
247 254parallel
Strand 8
A
281 286parallel
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