Analysis of interatomic Contacts of Structural Units in PDB entry:
5G0H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5G0H entry

There is 1 chain in PDB entry 5G0H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 441ASN 800
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 5G0H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
449 455Right-handed 310
Helix 2
2
A
467 480Right-handed alpha
Helix 3
3
A
482 486Right-handed 310
Helix 4
4
A
495 500Right-handed alpha
Helix 5
5
A
504 514Right-handed alpha
Helix 6
6
A
515 517Right-handed 310
Helix 7
7
A
518 527Right-handed alpha
Helix 8
8
A
537 558Right-handed alpha
Helix 9
9
A
587 599Right-handed alpha
Helix 10
10
A
616 624Right-handed alpha
Helix 11
11
A
638 641Right-handed 310
Helix 12
12
A
646 650Right-handed 310
Helix 13
13
A
656 660Right-handed 310
Helix 14
14
A
674 685Right-handed alpha
Helix 15
15
A
685 694Right-handed alpha
Helix 16
16
A
718 730Right-handed alpha
Helix 17
17
A
731 735Right-handed 310
Helix 18
18
A
746 762Right-handed alpha
Helix 19
19
A
776 791Right-handed alpha
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There is 1 sheet ( AA) in PDB entry 5G0H.

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
487 488first strand
Strand 2
A
444 447parallel
Strand 3
A
563 566parallel
Strand 4
A
737 741parallel
Strand 5
A
697 702parallel
Strand 6
A
606 610parallel
Strand 7
A
629 636parallel
Strand 8
A
663 668parallel
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