Analysis of interatomic Contacts of Structural Units in PDB entry:
5G0J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5G0J entry

There is 1 chain in PDB entry 5G0J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 54LEU 809
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 5G0J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
68 73Right-handed 310
Helix 2
2
A
86 99Right-handed alpha
Helix 3
3
A
101 105Right-handed 310
Helix 4
4
A
114 119Right-handed alpha
Helix 5
5
A
123 133Right-handed alpha
Helix 6
6
A
134 136Right-handed 310
Helix 7
7
A
137 147Right-handed alpha
Helix 8
8
A
156 177Right-handed alpha
Helix 9
9
A
206 219Right-handed alpha
Helix 10
10
A
234 241Right-handed alpha
Helix 11
11
A
274 278Right-handed 310
Helix 12
12
A
292 303Right-handed alpha
Helix 13
13
A
303 312Right-handed alpha
Helix 14
14
A
337 350Right-handed alpha
Helix 15
15
A
351 353Right-handed 310
Helix 16
16
A
364 380Right-handed alpha
Helix 17
17
A
394 409Right-handed alpha
Helix 18
18
A
414 418Right-handed 310
Helix 19
19
A
449 454Right-handed 310
Helix 20
20
A
467 480Right-handed alpha
Helix 21
21
A
482 486Right-handed 310
Helix 22
22
A
495 501Right-handed alpha
Helix 23
23
A
504 514Right-handed alpha
Helix 24
24
A
518 528Right-handed alpha
Helix 25
25
A
537 558Right-handed alpha
Helix 26
26
A
587 600Right-handed alpha
Helix 27
27
A
616 623Right-handed alpha
Helix 28
28
A
638 641Right-handed 310
Helix 29
29
A
646 650Right-handed 310
Helix 30
30
A
656 660Right-handed 310
Helix 31
31
A
674 685Right-handed alpha
Helix 32
32
A
685 694Right-handed alpha
Helix 33
33
A
718 730Right-handed alpha
Helix 34
34
A
731 735Right-handed 310
Helix 35
35
A
746 762Right-handed alpha
Helix 36
36
A
776 791Right-handed alpha
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There are 2 sheets in PDB entry 5G0J. Click on sheet of interest to get list of strands forming it: AA, AB,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 107first strand
Strand 2
A
63 66parallel
Strand 3
A
182 185parallel
Strand 4
A
355 359parallel
Strand 5
A
315 320parallel
Strand 6
A
224 228parallel
Strand 7
A
247 254parallel
Strand 8
A
281 286parallel
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There are 8 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
487 488first strand
Strand 2
A
444 447parallel
Strand 3
A
563 566parallel
Strand 4
A
737 741parallel
Strand 5
A
697 702parallel
Strand 6
A
606 610parallel
Strand 7
A
629 636parallel
Strand 8
A
663 668parallel
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