Analysis of interatomic Contacts of Structural Units in PDB entry:
5G24


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5G24 entry

There are 2 chains in PDB entry 5G24 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 33ARG 236
B
 GLU 39ARG 236
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 5G24. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
34 62Right-handed alpha
Helix 2
2
A
206 211Right-handed alpha
Helix 3
3
A
232 235Right-handed 310
Helix 4
4
B
39 62Right-handed alpha
Helix 5
5
B
206 211Right-handed alpha
Helix 6
6
B
232 235Right-handed 310
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There are 4 sheets in PDB entry 5G24. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 136first strand
Strand 2
A
115 122anti-parallel
Strand 3
A
104 112anti-parallel
Strand 4
A
82 88anti-parallel
Strand 5
A
69 75anti-parallel
Strand 6
A
160 164anti-parallel
Strand 7
A
169 170anti-parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
154 156first strand
Strand 2
A
141 151anti-parallel
Strand 3
A
173 184anti-parallel
Strand 4
A
221 230anti-parallel
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There are 7 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
132 136first strand
Strand 2
B
115 122anti-parallel
Strand 3
B
104 112anti-parallel
Strand 4
B
82 88anti-parallel
Strand 5
B
69 75anti-parallel
Strand 6
B
160 164anti-parallel
Strand 7
B
169 170anti-parallel
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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
154 156first strand
Strand 2
B
141 151anti-parallel
Strand 3
B
173 184anti-parallel
Strand 4
B
221 230anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il