Analysis of interatomic Contacts of Structural Units in PDB entry:
5G2E

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5G2E entry

There are 24 chains in PDB entry 5G2E (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 82	LEU 365
B	GLY 83	LEU 365
C	THR 16	GLY 105
D	TYR 34	LYS 122
E	SER 82	LEU 365
F	GLY 83	LEU 365
G	THR 16	GLY 105
H	TYR 34	LYS 122
I	SER 82	LEU 365
J	GLY 83	LEU 365
K	THR 16	GLY 105
L	TYR 34	LYS 122
M	SER 82	LEU 365
N	GLY 83	LEU 365
O	THR 16	GLY 105
P	TYR 34	LYS 122
Q	SER 82	LEU 365
R	GLY 83	LEU 365
S	THR 16	GLY 105
T	TYR 34	LYS 122
U	SER 82	LEU 365
V	GLY 83	LEU 365
W	THR 16	GLY 105
X	TYR 34	LYS 122

There are174 helices in PDB entry 5G2E. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	82	87	Right-handed alpha
Helix 2	2	A	89	140	Right-handed alpha
Helix 3	3	A	146	160	Right-handed alpha
Helix 4	4	A	187	194	Right-handed alpha
Helix 5	5	A	196	201	Right-handed alpha
Helix 6	6	A	204	212	Right-handed alpha
Helix 7	7	A	311	317	Right-handed 310
Helix 8	8	A	332	351	Right-handed alpha
Helix 9	9	A	355	362	Right-handed alpha
Helix 10	10	B	89	140	Right-handed alpha
Helix 11	11	B	146	160	Right-handed alpha
Helix 12	12	B	162	166	Right-handed 310
Helix 13	13	B	187	194	Right-handed alpha
Helix 14	14	B	196	201	Right-handed alpha
Helix 15	15	B	204	211	Right-handed alpha
Helix 16	16	B	278	282	Right-handed 310
Helix 17	17	B	311	317	Right-handed 310
Helix 18	18	B	329	334	Right-handed alpha
Helix 19	19	B	335	351	Right-handed alpha
Helix 20	20	B	355	362	Right-handed alpha
Helix 21	21	C	18	22	Right-handed 310
Helix 22	22	C	26	37	Right-handed alpha
Helix 23	23	C	45	73	Right-handed alpha
Helix 24	24	C	79	90	Right-handed alpha
Helix 25	25	C	90	97	Right-handed alpha
Helix 26	26	D	34	46	Right-handed alpha
Helix 27	27	D	52	81	Right-handed alpha
Helix 28	28	D	87	99	Right-handed alpha
Helix 29	29	D	100	121	Right-handed alpha
Helix 30	30	E	82	87	Right-handed alpha
Helix 31	31	E	89	140	Right-handed alpha
Helix 32	32	E	146	160	Right-handed alpha
Helix 33	33	E	187	194	Right-handed alpha
Helix 34	34	E	196	201	Right-handed alpha
Helix 35	35	E	204	212	Right-handed alpha
Helix 36	36	E	311	317	Right-handed 310
Helix 37	37	E	332	351	Right-handed alpha
Helix 38	38	E	355	362	Right-handed alpha
Helix 39	39	F	89	140	Right-handed alpha
Helix 40	40	F	146	160	Right-handed alpha
Helix 41	41	F	162	166	Right-handed 310
Helix 42	42	F	187	194	Right-handed alpha
Helix 43	43	F	196	201	Right-handed alpha
Helix 44	44	F	204	211	Right-handed alpha
Helix 45	45	F	278	282	Right-handed 310
Helix 46	46	F	311	317	Right-handed 310
Helix 47	47	F	329	334	Right-handed alpha
Helix 48	48	F	335	351	Right-handed alpha
Helix 49	49	F	355	362	Right-handed alpha
Helix 50	50	G	18	22	Right-handed 310
Helix 51	51	G	26	37	Right-handed alpha
Helix 52	52	G	45	73	Right-handed alpha
Helix 53	53	G	79	90	Right-handed alpha
Helix 54	54	G	90	99	Right-handed alpha
Helix 55	55	H	34	46	Right-handed alpha
Helix 56	56	H	52	81	Right-handed alpha
Helix 57	57	H	87	99	Right-handed alpha
Helix 58	58	H	100	121	Right-handed alpha
Helix 59	59	I	82	87	Right-handed alpha
Helix 60	60	I	89	140	Right-handed alpha
Helix 61	61	I	146	160	Right-handed alpha
Helix 62	62	I	187	194	Right-handed alpha
Helix 63	63	I	196	201	Right-handed alpha
Helix 64	64	I	204	212	Right-handed alpha
Helix 65	65	I	311	317	Right-handed 310
Helix 66	66	I	332	351	Right-handed alpha
Helix 67	67	I	355	362	Right-handed alpha
Helix 68	68	J	89	140	Right-handed alpha
Helix 69	69	J	146	160	Right-handed alpha
Helix 70	70	J	162	166	Right-handed 310
Helix 71	71	J	187	194	Right-handed alpha
Helix 72	72	J	196	201	Right-handed alpha
Helix 73	73	J	204	211	Right-handed alpha
Helix 74	74	J	278	282	Right-handed 310
Helix 75	75	J	311	317	Right-handed 310
Helix 76	76	J	329	334	Right-handed alpha
Helix 77	77	J	335	351	Right-handed alpha
Helix 78	78	J	355	362	Right-handed alpha
Helix 79	79	K	18	22	Right-handed 310
Helix 80	80	K	26	37	Right-handed alpha
Helix 81	81	K	45	73	Right-handed alpha
Helix 82	82	K	79	90	Right-handed alpha
Helix 83	83	K	92	102	Right-handed alpha
Helix 84	84	L	34	46	Right-handed alpha
Helix 85	85	L	52	81	Right-handed alpha
Helix 86	86	L	87	99	Right-handed alpha
Helix 87	87	L	100	121	Right-handed alpha
Helix 88	88	M	82	87	Right-handed alpha
Helix 89	89	M	89	140	Right-handed alpha
Helix 90	90	M	146	160	Right-handed alpha
Helix 91	91	M	187	194	Right-handed alpha
Helix 92	92	M	196	201	Right-handed alpha
Helix 93	93	M	204	212	Right-handed alpha
Helix 94	94	M	311	317	Right-handed 310
Helix 95	95	M	332	351	Right-handed alpha
Helix 96	96	M	355	362	Right-handed alpha
Helix 97	97	N	89	140	Right-handed alpha
Helix 98	98	N	146	160	Right-handed alpha
Helix 99	99	N	162	166	Right-handed 310
Helix 100	100	N	187	194	Right-handed alpha
Helix 101	101	N	196	201	Right-handed alpha
Helix 102	102	N	204	211	Right-handed alpha
Helix 103	103	N	278	282	Right-handed 310
Helix 104	104	N	311	317	Right-handed 310
Helix 105	105	N	329	334	Right-handed alpha
Helix 106	106	N	335	351	Right-handed alpha
Helix 107	107	N	355	362	Right-handed alpha
Helix 108	108	O	18	22	Right-handed 310
Helix 109	109	O	26	37	Right-handed alpha
Helix 110	110	O	45	73	Right-handed alpha
Helix 111	111	O	79	90	Right-handed alpha
Helix 112	112	O	90	100	Right-handed alpha
Helix 113	113	P	34	46	Right-handed alpha
Helix 114	114	P	52	81	Right-handed alpha
Helix 115	115	P	87	99	Right-handed alpha
Helix 116	116	P	100	121	Right-handed alpha
Helix 117	117	Q	82	87	Right-handed alpha
Helix 118	118	Q	89	140	Right-handed alpha
Helix 119	119	Q	146	160	Right-handed alpha
Helix 120	120	Q	187	194	Right-handed alpha
Helix 121	121	Q	196	201	Right-handed alpha
Helix 122	122	Q	204	212	Right-handed alpha
Helix 123	123	Q	311	317	Right-handed 310
Helix 124	124	Q	332	351	Right-handed alpha
Helix 125	125	Q	355	362	Right-handed alpha
Helix 126	126	R	89	140	Right-handed alpha
Helix 127	127	R	146	160	Right-handed alpha
Helix 128	128	R	162	166	Right-handed 310
Helix 129	129	R	187	194	Right-handed alpha
Helix 130	130	R	196	201	Right-handed alpha
Helix 131	131	R	204	211	Right-handed alpha
Helix 132	132	R	278	282	Right-handed 310
Helix 133	133	R	311	317	Right-handed 310
Helix 134	134	R	329	334	Right-handed alpha
Helix 135	135	R	335	351	Right-handed alpha
Helix 136	136	R	355	362	Right-handed alpha
Helix 137	137	S	18	22	Right-handed 310
Helix 138	138	S	26	37	Right-handed alpha
Helix 139	139	S	45	73	Right-handed alpha
Helix 140	140	S	79	90	Right-handed alpha
Helix 141	141	S	92	102	Right-handed alpha
Helix 142	142	T	34	46	Right-handed alpha
Helix 143	143	T	52	81	Right-handed alpha
Helix 144	144	T	87	99	Right-handed alpha
Helix 145	145	T	100	121	Right-handed alpha
Helix 146	146	U	82	87	Right-handed alpha
Helix 147	147	U	89	140	Right-handed alpha
Helix 148	148	U	146	160	Right-handed alpha
Helix 149	149	U	187	194	Right-handed alpha
Helix 150	150	U	196	201	Right-handed alpha
Helix 151	151	U	204	212	Right-handed alpha
Helix 152	152	U	311	317	Right-handed 310
Helix 153	153	U	332	351	Right-handed alpha
Helix 154	154	U	355	362	Right-handed alpha
Helix 155	155	V	89	140	Right-handed alpha
Helix 156	156	V	146	160	Right-handed alpha
Helix 157	157	V	162	166	Right-handed 310
Helix 158	158	V	187	194	Right-handed alpha
Helix 159	159	V	196	201	Right-handed alpha
Helix 160	160	V	204	211	Right-handed alpha
Helix 161	161	V	278	282	Right-handed 310
Helix 162	162	V	311	317	Right-handed 310
Helix 163	163	V	329	334	Right-handed alpha
Helix 164	164	V	335	351	Right-handed alpha
Helix 165	165	V	355	362	Right-handed alpha
Helix 166	166	W	18	22	Right-handed 310
Helix 167	167	W	26	37	Right-handed alpha
Helix 168	168	W	45	73	Right-handed alpha
Helix 169	169	W	79	90	Right-handed alpha
Helix 170	170	W	90	101	Right-handed alpha
Helix 171	171	X	34	46	Right-handed alpha
Helix 172	172	X	52	81	Right-handed alpha
Helix 173	173	X	87	99	Right-handed alpha
Helix 174	174	X	100	121	Right-handed alpha

There are 24 sheets in PDB entry 5G2E. Click on sheet of interest to get list of strands forming it: AA, BA, CA, CB, EA, FA, GA, GB, IA, JA, KA, KB, MA, NA, OA, OB, QA, RA, SA, SB, UA, VA, WA, WB,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	214	221	first strand
Strand 2	A	228	235	anti-parallel
Strand 3	A	247	254	anti-parallel
Strand 4	A	266	271	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	214	222	first strand
Strand 2	B	228	235	anti-parallel
Strand 3	B	247	254	anti-parallel
Strand 4	B	266	271	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	42	43	first strand
Strand 2	D	85	86	parallel

Back to list of sheets
Back to top of page

There are 2 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	77	78	first strand
Strand 2	D	50	51	parallel

Back to list of sheets
Back to top of page

There are 4 strands in EA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	214	221	first strand
Strand 2	E	228	235	anti-parallel
Strand 3	E	247	254	anti-parallel
Strand 4	E	266	271	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in FA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	214	222	first strand
Strand 2	F	228	235	anti-parallel
Strand 3	F	247	254	anti-parallel
Strand 4	F	266	271	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in GA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	42	43	first strand
Strand 2	H	85	86	parallel

Back to list of sheets
Back to top of page

There are 2 strands in GB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	77	78	first strand
Strand 2	H	50	51	parallel

Back to list of sheets
Back to top of page

There are 4 strands in IA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	214	221	first strand
Strand 2	I	228	235	anti-parallel
Strand 3	I	247	254	anti-parallel
Strand 4	I	266	271	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in JA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	214	222	first strand
Strand 2	J	228	235	anti-parallel
Strand 3	J	247	254	anti-parallel
Strand 4	J	266	271	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in KA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	42	43	first strand
Strand 2	L	85	86	parallel

Back to list of sheets
Back to top of page

There are 2 strands in KB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	77	78	first strand
Strand 2	L	50	51	parallel

Back to list of sheets
Back to top of page

There are 4 strands in MA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	214	221	first strand
Strand 2	M	228	235	anti-parallel
Strand 3	M	247	254	anti-parallel
Strand 4	M	266	271	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in NA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	214	222	first strand
Strand 2	N	228	235	anti-parallel
Strand 3	N	247	254	anti-parallel
Strand 4	N	266	271	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in OA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	42	43	first strand
Strand 2	P	85	86	parallel

Back to list of sheets
Back to top of page

There are 2 strands in OB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	77	78	first strand
Strand 2	P	50	51	parallel

Back to list of sheets
Back to top of page

There are 4 strands in QA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	214	221	first strand
Strand 2	Q	228	235	anti-parallel
Strand 3	Q	247	254	anti-parallel
Strand 4	Q	266	271	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in RA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	214	222	first strand
Strand 2	R	228	235	anti-parallel
Strand 3	R	247	254	anti-parallel
Strand 4	R	266	271	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in SA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	42	43	first strand
Strand 2	T	85	86	parallel

Back to list of sheets
Back to top of page

There are 2 strands in SB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	77	78	first strand
Strand 2	T	50	51	parallel

Back to list of sheets
Back to top of page

There are 4 strands in UA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	214	221	first strand
Strand 2	U	228	235	anti-parallel
Strand 3	U	247	254	anti-parallel
Strand 4	U	266	271	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in VA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	214	222	first strand
Strand 2	V	228	235	anti-parallel
Strand 3	V	247	254	anti-parallel
Strand 4	V	266	271	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in WA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	42	43	first strand
Strand 2	X	85	86	parallel

Back to list of sheets
Back to top of page

There are 2 strands in WB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	77	78	first strand
Strand 2	X	50	51	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5G2E

Analysis of interatomic Contacts of Structural Units in PDB entry:
5G2E