Analysis of interatomic Contacts of Structural Units in PDB entry:
5G3P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5G3P entry

There are 12 chains in PDB entry 5G3P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2ILE 164
A
 HIS 166LYS 328
B
 GLY 2ILE 164
B
 HIS 166LYS 327
C
 GLY 2ILE 164
C
 HIS 166VAL 326
D
 GLY 2ILE 164
D
 HIS 166LYS 327
E
 GLY 2ILE 164
E
 HIS 166VAL 326
F
 GLY 2ILE 164
F
 HIS 166VAL 326
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 72 helices in PDB entry 5G3P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
28 50Right-handed alpha
Helix 2
2
A
73 77Right-handed 310
Helix 3
3
A
82 96Right-handed alpha
Helix 4
4
A
155 157Right-handed 310
Helix 5
5
A
166 169Right-handed 310
Helix 6
6
A
170 180Right-handed alpha
Helix 7
7
A
195 210Right-handed alpha
Helix 8
8
A
258 269Right-handed alpha
Helix 9
9
A
273 278Right-handed alpha
Helix 10
10
A
295 303Right-handed alpha
Helix 11
11
A
310 314Right-handed 310
Helix 12
12
A
319 323Right-handed 310
Helix 13
13
B
28 50Right-handed alpha
Helix 14
14
B
73 77Right-handed 310
Helix 15
15
B
82 96Right-handed alpha
Helix 16
16
B
155 157Right-handed 310
Helix 17
17
B
166 169Right-handed 310
Helix 18
18
B
170 180Right-handed alpha
Helix 19
19
B
195 209Right-handed alpha
Helix 20
20
B
258 269Right-handed alpha
Helix 21
21
B
273 278Right-handed alpha
Helix 22
22
B
295 303Right-handed alpha
Helix 23
23
B
310 314Right-handed 310
Helix 24
24
B
319 323Right-handed 310
Helix 25
25
C
28 50Right-handed alpha
Helix 26
26
C
73 77Right-handed 310
Helix 27
27
C
82 96Right-handed alpha
Helix 28
28
C
155 157Right-handed 310
Helix 29
29
C
166 169Right-handed 310
Helix 30
30
C
170 180Right-handed alpha
Helix 31
31
C
195 209Right-handed alpha
Helix 32
32
C
258 269Right-handed alpha
Helix 33
33
C
273 278Right-handed alpha
Helix 34
34
C
295 303Right-handed alpha
Helix 35
35
C
310 314Right-handed 310
Helix 36
36
C
319 323Right-handed 310
Helix 37
37
D
28 50Right-handed alpha
Helix 38
38
D
73 77Right-handed 310
Helix 39
39
D
82 96Right-handed alpha
Helix 40
40
D
155 157Right-handed 310
Helix 41
41
D
166 169Right-handed 310
Helix 42
42
D
170 180Right-handed alpha
Helix 43
43
D
195 209Right-handed alpha
Helix 44
44
D
258 269Right-handed alpha
Helix 45
45
D
273 278Right-handed alpha
Helix 46
46
D
295 303Right-handed alpha
Helix 47
47
D
310 314Right-handed 310
Helix 48
48
D
319 323Right-handed 310
Helix 49
49
E
28 50Right-handed alpha
Helix 50
50
E
73 77Right-handed 310
Helix 51
51
E
82 96Right-handed alpha
Helix 52
52
E
155 157Right-handed 310
Helix 53
53
E
166 169Right-handed 310
Helix 54
54
E
170 180Right-handed alpha
Helix 55
55
E
195 209Right-handed alpha
Helix 56
56
E
258 269Right-handed alpha
Helix 57
57
E
273 278Right-handed alpha
Helix 58
58
E
295 303Right-handed alpha
Helix 59
59
E
310 314Right-handed 310
Helix 60
60
E
319 323Right-handed 310
Helix 61
61
F
28 50Right-handed alpha
Helix 62
62
F
73 77Right-handed 310
Helix 63
63
F
82 96Right-handed alpha
Helix 64
64
F
155 157Right-handed 310
Helix 65
65
F
166 169Right-handed 310
Helix 66
66
F
170 180Right-handed alpha
Helix 67
67
F
195 210Right-handed alpha
Helix 68
68
F
258 269Right-handed alpha
Helix 69
69
F
273 278Right-handed alpha
Helix 70
70
F
295 303Right-handed alpha
Helix 71
71
F
310 314Right-handed 310
Helix 72
72
F
319 323Right-handed 310
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There are 18 sheets in PDB entry 5G3P. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC, CA, CB, CC, A, DB, C, EA, EB, EC, FA, FB, FC,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 131first strand
Strand 2
A
114 120anti-parallel
Strand 3
A
98 105anti-parallel
Strand 4
A
53 57parallel
Strand 5
A
14 19parallel
Strand 6
A
252 257anti-parallel
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There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
152 153first strand
Strand 2
A
159 164anti-parallel
Strand 3
A
184 189parallel
Strand 4
A
213 218parallel
Strand 5
A
233 235anti-parallel
Strand 6
A
241 244anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
220 222first strand
Strand 2
A
227 229anti-parallel
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There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
126 131first strand
Strand 2
B
114 120anti-parallel
Strand 3
B
98 105anti-parallel
Strand 4
B
53 57parallel
Strand 5
B
14 19parallel
Strand 6
B
252 257anti-parallel
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There are 6 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
152 153first strand
Strand 2
B
159 164anti-parallel
Strand 3
B
184 189parallel
Strand 4
B
213 218parallel
Strand 5
B
233 235anti-parallel
Strand 6
B
241 244anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
220 222first strand
Strand 2
B
227 229anti-parallel
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There are 6 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
126 131first strand
Strand 2
C
114 120anti-parallel
Strand 3
C
98 105anti-parallel
Strand 4
C
53 57parallel
Strand 5
C
14 19parallel
Strand 6
C
252 257anti-parallel
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There are 6 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
152 153first strand
Strand 2
C
159 164anti-parallel
Strand 3
C
184 189parallel
Strand 4
C
213 218parallel
Strand 5
C
233 235anti-parallel
Strand 6
C
241 244anti-parallel
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There are 2 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
220 222first strand
Strand 2
C
227 229anti-parallel
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There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
126 131first strand
Strand 2
D
114 120anti-parallel
Strand 3
D
98 105anti-parallel
Strand 4
D
53 57parallel
Strand 5
D
14 19parallel
Strand 6
D
252 257anti-parallel
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There are 6 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
152 153first strand
Strand 2
D
159 164anti-parallel
Strand 3
D
184 189parallel
Strand 4
D
213 218parallel
Strand 5
D
233 235anti-parallel
Strand 6
D
241 244anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
220 222first strand
Strand 2
D
227 229anti-parallel
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There are 6 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
126 131first strand
Strand 2
E
114 120anti-parallel
Strand 3
E
98 105anti-parallel
Strand 4
E
53 57parallel
Strand 5
E
14 19parallel
Strand 6
E
252 257anti-parallel
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There are 6 strands in EB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
152 153first strand
Strand 2
E
159 164anti-parallel
Strand 3
E
184 189parallel
Strand 4
E
213 218parallel
Strand 5
E
233 235anti-parallel
Strand 6
E
241 244anti-parallel
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There are 2 strands in EC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
220 222first strand
Strand 2
E
227 229anti-parallel
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There are 6 strands in FA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
126 131first strand
Strand 2
F
114 120anti-parallel
Strand 3
F
98 105anti-parallel
Strand 4
F
53 57parallel
Strand 5
F
14 19parallel
Strand 6
F
252 257anti-parallel
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There are 6 strands in FB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
152 153first strand
Strand 2
F
159 164anti-parallel
Strand 3
F
184 189parallel
Strand 4
F
213 218parallel
Strand 5
F
233 235anti-parallel
Strand 6
F
241 244anti-parallel
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There are 2 strands in FC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
220 222first strand
Strand 2
F
227 229anti-parallel
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