Analysis of interatomic Contacts of Structural Units in PDB entry:
5G4F

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5G4F entry

There are 6 chains in PDB entry 5G4F (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	THR 726
B	MET 1	THR 726
C	MET 1	THR 726
D	MET 1	THR 726
E	MET 1	THR 726
P	MET 1	THR 726

There are188 helices in PDB entry 5G4F. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	27	34	Right-handed alpha
Helix 2	2	A	70	78	Right-handed alpha
Helix 3	3	A	103	108	Right-handed alpha
Helix 4	4	A	114	119	Right-handed alpha
Helix 5	5	A	119	124	Right-handed alpha
Helix 6	6	A	195	212	Right-handed alpha
Helix 7	7	A	236	249	Right-handed alpha
Helix 8	8	A	256	263	Right-handed alpha
Helix 9	9	A	267	282	Right-handed alpha
Helix 10	10	A	291	296	Right-handed alpha
Helix 11	11	A	305	320	Right-handed alpha
Helix 12	12	A	340	345	Right-handed alpha
Helix 13	13	A	359	372	Right-handed alpha
Helix 14	14	A	387	392	Right-handed alpha
Helix 15	15	A	398	422	Right-handed alpha
Helix 16	16	A	428	435	Right-handed alpha
Helix 17	17	A	438	448	Right-handed alpha
Helix 18	18	A	465	469	Right-handed 310
Helix 19	19	A	472	483	Right-handed alpha
Helix 20	20	A	483	489	Right-handed alpha
Helix 21	21	A	491	495	Right-handed 310
Helix 22	22	A	513	525	Right-handed alpha
Helix 23	23	A	533	542	Right-handed alpha
Helix 24	24	A	545	559	Right-handed alpha
Helix 25	25	A	568	573	Right-handed 310
Helix 26	26	A	586	599	Right-handed alpha
Helix 27	27	A	618	623	Right-handed alpha
Helix 28	28	A	637	652	Right-handed alpha
Helix 29	29	A	659	667	Right-handed alpha
Helix 30	30	A	671	686	Right-handed alpha
Helix 31	31	A	697	708	Right-handed alpha
Helix 32	32	A	713	726	Right-handed alpha
Helix 33	33	B	18	22	Right-handed 310
Helix 34	34	B	27	35	Right-handed alpha
Helix 35	35	B	70	78	Right-handed alpha
Helix 36	36	B	103	108	Right-handed alpha
Helix 37	37	B	119	124	Right-handed alpha
Helix 38	38	B	196	211	Right-handed alpha
Helix 39	39	B	236	249	Right-handed alpha
Helix 40	40	B	256	261	Right-handed alpha
Helix 41	41	B	266	282	Right-handed alpha
Helix 42	42	B	291	296	Right-handed alpha
Helix 43	43	B	304	320	Right-handed alpha
Helix 44	44	B	340	345	Right-handed alpha
Helix 45	45	B	359	372	Right-handed alpha
Helix 46	46	B	387	392	Right-handed alpha
Helix 47	47	B	398	422	Right-handed alpha
Helix 48	48	B	428	435	Right-handed alpha
Helix 49	49	B	438	448	Right-handed alpha
Helix 50	50	B	472	497	Right-handed alpha
Helix 51	51	B	513	526	Right-handed alpha
Helix 52	52	B	533	543	Right-handed alpha
Helix 53	53	B	545	559	Right-handed alpha
Helix 54	54	B	568	576	Right-handed alpha
Helix 55	55	B	586	599	Right-handed alpha
Helix 56	56	B	600	603	Right-handed 310
Helix 57	57	B	618	623	Right-handed alpha
Helix 58	58	B	637	650	Right-handed alpha
Helix 59	59	B	659	667	Right-handed alpha
Helix 60	60	B	671	687	Right-handed alpha
Helix 61	61	B	697	708	Right-handed alpha
Helix 62	62	B	713	726	Right-handed alpha
Helix 63	63	C	27	35	Right-handed alpha
Helix 64	64	C	70	78	Right-handed alpha
Helix 65	65	C	103	108	Right-handed alpha
Helix 66	66	C	114	119	Right-handed alpha
Helix 67	67	C	196	211	Right-handed alpha
Helix 68	68	C	236	249	Right-handed alpha
Helix 69	69	C	256	263	Right-handed alpha
Helix 70	70	C	267	283	Right-handed alpha
Helix 71	71	C	291	296	Right-handed alpha
Helix 72	72	C	304	321	Right-handed alpha
Helix 73	73	C	340	345	Right-handed alpha
Helix 74	74	C	359	372	Right-handed alpha
Helix 75	75	C	386	392	Right-handed alpha
Helix 76	76	C	398	422	Right-handed alpha
Helix 77	77	C	428	435	Right-handed alpha
Helix 78	78	C	439	448	Right-handed alpha
Helix 79	79	C	472	483	Right-handed alpha
Helix 80	80	C	483	489	Right-handed alpha
Helix 81	81	C	489	497	Right-handed alpha
Helix 82	82	C	513	525	Right-handed alpha
Helix 83	83	C	533	543	Right-handed alpha
Helix 84	84	C	545	559	Right-handed alpha
Helix 85	85	C	569	572	Right-handed 310
Helix 86	86	C	586	599	Right-handed alpha
Helix 87	87	C	618	623	Right-handed alpha
Helix 88	88	C	637	652	Right-handed alpha
Helix 89	89	C	661	667	Right-handed alpha
Helix 90	90	C	671	686	Right-handed alpha
Helix 91	91	C	697	708	Right-handed alpha
Helix 92	92	C	714	726	Right-handed alpha
Helix 93	93	D	27	35	Right-handed alpha
Helix 94	94	D	70	78	Right-handed alpha
Helix 95	95	D	118	123	Right-handed alpha
Helix 96	96	D	196	208	Right-handed alpha
Helix 97	97	D	234	249	Right-handed alpha
Helix 98	98	D	256	263	Right-handed alpha
Helix 99	99	D	266	283	Right-handed alpha
Helix 100	100	D	291	296	Right-handed alpha
Helix 101	101	D	304	321	Right-handed alpha
Helix 102	102	D	335	339	Right-handed 310
Helix 103	103	D	340	345	Right-handed 310
Helix 104	104	D	359	374	Right-handed alpha
Helix 105	105	D	387	394	Right-handed alpha
Helix 106	106	D	398	417	Right-handed alpha
Helix 107	107	D	417	422	Right-handed alpha
Helix 108	108	D	428	435	Right-handed alpha
Helix 109	109	D	440	447	Right-handed alpha
Helix 110	110	D	472	489	Right-handed alpha
Helix 111	111	D	491	497	Right-handed alpha
Helix 112	112	D	513	526	Right-handed alpha
Helix 113	113	D	533	543	Right-handed alpha
Helix 114	114	D	546	559	Right-handed alpha
Helix 115	115	D	571	576	Right-handed alpha
Helix 116	116	D	586	599	Right-handed alpha
Helix 117	117	D	618	623	Right-handed 310
Helix 118	118	D	637	650	Right-handed alpha
Helix 119	119	D	659	666	Right-handed alpha
Helix 120	120	D	671	686	Right-handed alpha
Helix 121	121	D	697	708	Right-handed alpha
Helix 122	122	D	713	724	Right-handed alpha
Helix 123	123	E	27	35	Right-handed alpha
Helix 124	124	E	70	78	Right-handed alpha
Helix 125	125	E	103	108	Right-handed alpha
Helix 126	126	E	115	124	Right-handed alpha
Helix 127	127	E	188	192	Right-handed 310
Helix 128	128	E	195	212	Right-handed alpha
Helix 129	129	E	212	217	Right-handed alpha
Helix 130	130	E	236	249	Right-handed alpha
Helix 131	131	E	256	263	Right-handed alpha
Helix 132	132	E	266	283	Right-handed alpha
Helix 133	133	E	291	296	Right-handed alpha
Helix 134	134	E	304	320	Right-handed alpha
Helix 135	135	E	340	344	Right-handed 310
Helix 136	136	E	361	373	Right-handed alpha
Helix 137	137	E	387	393	Right-handed alpha
Helix 138	138	E	398	422	Right-handed alpha
Helix 139	139	E	428	435	Right-handed alpha
Helix 140	140	E	438	448	Right-handed alpha
Helix 141	141	E	472	483	Right-handed alpha
Helix 142	142	E	483	489	Right-handed alpha
Helix 143	143	E	489	496	Right-handed alpha
Helix 144	144	E	513	526	Right-handed alpha
Helix 145	145	E	533	543	Right-handed alpha
Helix 146	146	E	546	560	Right-handed alpha
Helix 147	147	E	573	577	Right-handed 310
Helix 148	148	E	586	599	Right-handed alpha
Helix 149	149	E	613	617	Right-handed 310
Helix 150	150	E	637	650	Right-handed alpha
Helix 151	151	E	659	667	Right-handed alpha
Helix 152	152	E	671	686	Right-handed alpha
Helix 153	153	E	697	708	Right-handed alpha
Helix 154	154	E	713	726	Right-handed alpha
Helix 155	155	P	27	32	Right-handed alpha
Helix 156	156	P	47	49	Right-handed 310
Helix 157	157	P	70	78	Right-handed alpha
Helix 158	158	P	103	108	Right-handed alpha
Helix 159	159	P	118	124	Right-handed alpha
Helix 160	160	P	196	211	Right-handed alpha
Helix 161	161	P	236	249	Right-handed alpha
Helix 162	162	P	256	263	Right-handed alpha
Helix 163	163	P	266	282	Right-handed alpha
Helix 164	164	P	291	296	Right-handed alpha
Helix 165	165	P	304	320	Right-handed alpha
Helix 166	166	P	335	339	Right-handed 310
Helix 167	167	P	340	345	Right-handed alpha
Helix 168	168	P	359	372	Right-handed alpha
Helix 169	169	P	386	393	Right-handed alpha
Helix 170	170	P	398	422	Right-handed alpha
Helix 171	171	P	429	435	Right-handed alpha
Helix 172	172	P	438	447	Right-handed alpha
Helix 173	173	P	465	469	Right-handed 310
Helix 174	174	P	472	483	Right-handed alpha
Helix 175	175	P	483	489	Right-handed alpha
Helix 176	176	P	491	496	Right-handed alpha
Helix 177	177	P	513	526	Right-handed alpha
Helix 178	178	P	533	543	Right-handed alpha
Helix 179	179	P	545	559	Right-handed alpha
Helix 180	180	P	571	577	Right-handed alpha
Helix 181	181	P	588	599	Right-handed alpha
Helix 182	182	P	613	617	Right-handed 310
Helix 183	183	P	618	623	Right-handed 310
Helix 184	184	P	637	650	Right-handed alpha
Helix 185	185	P	659	667	Right-handed alpha
Helix 186	186	P	671	686	Right-handed alpha
Helix 187	187	P	697	708	Right-handed alpha
Helix 188	188	P	713	724	Right-handed alpha

There are 34 sheets in PDB entry 5G4F. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, BA, BB, BC, BD, BE, BF, BG, CA, CB, CC, CD, CE, A, DB, C, DD, DE, EA, EB, EC, ED, EE, PA, PB, PC, PD, PE, PF,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	10	13	first strand
Strand 2	A	66	69	parallel

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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	23	25	first strand
Strand 2	A	52	57	parallel
Strand 3	A	41	45	anti-parallel
Strand 4	A	86	89	anti-parallel

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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	134	136	first strand
Strand 2	A	149	155	anti-parallel
Strand 3	A	97	101	anti-parallel
Strand 4	A	169	170	parallel

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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	127	129	first strand
Strand 2	A	162	164	anti-parallel

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There are 5 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	251	255	first strand
Strand 2	A	285	289	parallel
Strand 3	A	327	332	parallel
Strand 4	A	227	229	parallel
Strand 5	A	351	352	parallel

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There are 5 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	528	532	first strand
Strand 2	A	562	566	parallel
Strand 3	A	607	610	parallel
Strand 4	A	503	507	parallel
Strand 5	A	630	632	parallel

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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	50	55	first strand
Strand 2	B	41	46	anti-parallel
Strand 3	B	84	89	anti-parallel
Strand 4	B	8	13	anti-parallel
Strand 5	B	67	69	parallel

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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	97	99	first strand
Strand 2	B	169	171	parallel

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There are 3 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	101	102	first strand
Strand 2	B	148	151	anti-parallel
Strand 3	B	134	137	anti-parallel

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There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	128	129	first strand
Strand 2	B	162	163	anti-parallel

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There are 2 strands in BE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	227	228	first strand
Strand 2	B	351	352	parallel

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There are 3 strands in BF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	252	255	first strand
Strand 2	B	286	289	parallel
Strand 3	B	328	331	parallel

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There are 5 strands in BG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	528	532	first strand
Strand 2	B	562	566	parallel
Strand 3	B	605	611	parallel
Strand 4	B	503	507	parallel
Strand 5	B	629	632	parallel

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There are 6 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	10	13	first strand
Strand 2	C	66	69	parallel
Strand 3	C	23	25	anti-parallel
Strand 4	C	51	57	parallel
Strand 5	C	41	46	anti-parallel
Strand 6	C	85	89	anti-parallel

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There are 4 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	134	137	first strand
Strand 2	C	148	155	anti-parallel
Strand 3	C	98	102	anti-parallel
Strand 4	C	171	172	parallel

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There are 2 strands in CC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	128	129	first strand
Strand 2	C	162	163	anti-parallel

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There are 5 strands in CD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	251	255	first strand
Strand 2	C	285	289	parallel
Strand 3	C	328	332	parallel
Strand 4	C	227	229	parallel
Strand 5	C	351	352	parallel

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There are 5 strands in CE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	528	532	first strand
Strand 2	C	562	567	parallel
Strand 3	C	606	610	parallel
Strand 4	C	503	507	parallel
Strand 5	C	629	632	parallel

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There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	11	13	first strand
Strand 2	D	67	69	parallel

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There are 3 strands in DB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	50	55	first strand
Strand 2	D	41	46	anti-parallel
Strand 3	D	85	88	anti-parallel

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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	127	129	first strand
Strand 2	D	162	172	anti-parallel
Strand 3	D	95	102	parallel
Strand 4	D	148	155	anti-parallel
Strand 5	D	133	137	anti-parallel

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There are 5 strands in DD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	251	255	first strand
Strand 2	D	285	289	parallel
Strand 3	D	328	332	parallel
Strand 4	D	226	229	parallel
Strand 5	D	351	353	parallel

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There are 5 strands in DE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	528	532	first strand
Strand 2	D	562	567	parallel
Strand 3	D	607	611	parallel
Strand 4	D	504	507	parallel
Strand 5	D	629	632	parallel

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There are 7 strands in EA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	8	13	first strand
Strand 2	E	84	89	anti-parallel
Strand 3	E	41	45	anti-parallel
Strand 4	E	51	57	anti-parallel
Strand 5	E	23	25	parallel
Strand 6	E	67	69	anti-parallel
Strand 7	E	8	13	parallel

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There are 4 strands in EB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	134	136	first strand
Strand 2	E	149	155	anti-parallel
Strand 3	E	97	102	anti-parallel
Strand 4	E	169	172	parallel

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There are 2 strands in EC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	127	129	first strand
Strand 2	E	162	164	anti-parallel

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There are 5 strands in ED sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	251	254	first strand
Strand 2	E	285	289	parallel
Strand 3	E	328	332	parallel
Strand 4	E	226	229	parallel
Strand 5	E	351	352	parallel

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There are 5 strands in EE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	528	532	first strand
Strand 2	E	562	567	parallel
Strand 3	E	606	610	parallel
Strand 4	E	504	507	parallel
Strand 5	E	629	632	parallel

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There are 2 strands in PA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	12	13	first strand
Strand 2	P	68	69	parallel

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There are 4 strands in PB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	23	25	first strand
Strand 2	P	51	57	parallel
Strand 3	P	41	45	anti-parallel
Strand 4	P	86	89	anti-parallel

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There are 4 strands in PC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	134	136	first strand
Strand 2	P	149	155	anti-parallel
Strand 3	P	98	102	anti-parallel
Strand 4	P	171	172	parallel

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There are 2 strands in PD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	127	129	first strand
Strand 2	P	162	164	anti-parallel

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There are 3 strands in PE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	251	255	first strand
Strand 2	P	285	289	parallel
Strand 3	P	327	331	parallel

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There are 5 strands in PF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	528	532	first strand
Strand 2	P	562	567	parallel
Strand 3	P	605	610	parallel
Strand 4	P	503	507	parallel
Strand 5	P	629	632	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5G4F

Analysis of interatomic Contacts of Structural Units in PDB entry:
5G4F