Analysis of interatomic Contacts of Structural Units in PDB entry:
5G5C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5G5C entry

There is 1 chain in PDB entry 5G5C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 19GLY 288
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 5G5C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
35 40Right-handed 310
Helix 2
2
A
84 95Right-handed alpha
Helix 3
3
A
120 136Right-handed alpha
Helix 4
4
A
137 140Right-handed 310
Helix 5
5
A
149 162Right-handed alpha
Helix 6
6
A
176 186Right-handed alpha
Helix 7
7
A
187 191Right-handed 310
Helix 8
8
A
192 206Right-handed alpha
Helix 9
9
A
216 221Right-handed alpha
Helix 10
10
A
237 249Right-handed alpha
Helix 11
11
A
266 271Right-handed alpha
Helix 12
12
A
271 288Right-handed alpha
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There is 1 sheet ( AA) in PDB entry 5G5C.

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 49first strand
Strand 2
A
55 61anti-parallel
Strand 3
A
98 102anti-parallel
Strand 4
A
67 72parallel
Strand 5
A
142 148parallel
Strand 6
A
165 171parallel
Strand 7
A
225 230parallel
Strand 8
A
255 260parallel
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