Analysis of interatomic Contacts of Structural Units in PDB entry:
5G5O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5G5O entry

There are 6 chains in PDB entry 5G5O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 29ALA 373
B
 GLY 29ALA 373
C
 SER 26ALA 373
D
 GLY 29ALA 373
E
 SER 26ALA 373
F
 GLY 29ALA 373
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 5G5O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
36 44Right-handed alpha
Helix 2
2
A
116 121Right-handed alpha
Helix 3
3
A
330 334Right-handed 310
Helix 4
4
A
353 355Right-handed 310
Helix 5
5
B
36 44Right-handed alpha
Helix 6
6
B
117 122Right-handed 310
Helix 7
7
B
330 334Right-handed 310
Helix 8
8
B
353 355Right-handed 310
Helix 9
9
C
36 44Right-handed alpha
Helix 10
10
C
118 122Right-handed 310
Helix 11
11
C
330 334Right-handed 310
Helix 12
12
C
353 355Right-handed 310
Helix 13
13
D
36 44Right-handed alpha
Helix 14
14
D
118 122Right-handed 310
Helix 15
15
D
330 334Right-handed 310
Helix 16
16
D
353 355Right-handed 310
Helix 17
17
E
36 44Right-handed alpha
Helix 18
18
E
117 122Right-handed 310
Helix 19
19
E
330 334Right-handed 310
Helix 20
20
E
353 355Right-handed 310
Helix 21
21
F
36 44Right-handed alpha
Helix 22
22
F
116 121Right-handed alpha
Helix 23
23
F
330 334Right-handed 310
Helix 24
24
F
353 355Right-handed 310
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There are 43 sheets in PDB entry 5G5O. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, BA, BB, BC, BD, BE, BF, BG, CA, CB, CC, CD, CE, CF, CG, A, DB, DC, DD, DE, DF, G, DH, EA, EB, EC, ED, EE, EF, EG, EH, EI, FA, FB, FC, FD, FE, FF,

There are 10 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 31first strand
Strand 2
A
46 49parallel
Strand 3
A
67 69parallel
Strand 4
A
96 99parallel
Strand 5
A
132 135parallel
Strand 6
A
166 168parallel
Strand 7
A
189 191parallel
Strand 8
A
210 212parallel
Strand 9
A
244 246parallel
Strand 10
A
287 289parallel
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There are 8 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 56first strand
Strand 2
A
74 76parallel
Strand 3
A
102 104parallel
Strand 4
A
138 140parallel
Strand 5
A
171 173parallel
Strand 6
A
194 196parallel
Strand 7
A
215 217parallel
Strand 8
A
249 251parallel
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There are 12 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 62first strand
Strand 2
A
84 87parallel
Strand 3
A
125 128parallel
Strand 4
A
145 150parallel
Strand 5
A
177 181parallel
Strand 6
A
200 204parallel
Strand 7
A
221 226parallel
Strand 8
A
276 279parallel
Strand 9
A
298 302parallel
Strand 10
A
326 328parallel
Strand 11
A
348 350parallel
Strand 12
A
363 365parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
263 265first strand
Strand 2
A
270 272anti-parallel
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There are 3 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
292 294first strand
Strand 2
A
315 317parallel
Strand 3
A
342 343parallel
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There are 3 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
309 312first strand
Strand 2
A
336 339parallel
Strand 3
A
357 358parallel
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There are 7 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 31first strand
Strand 2
B
46 49parallel
Strand 3
B
67 69parallel
Strand 4
B
96 99parallel
Strand 5
B
132 135parallel
Strand 6
B
166 168parallel
Strand 7
B
189 191parallel
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There are 8 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
54 56first strand
Strand 2
B
74 76parallel
Strand 3
B
102 104parallel
Strand 4
B
138 140parallel
Strand 5
B
171 173parallel
Strand 6
B
194 196parallel
Strand 7
B
215 217parallel
Strand 8
B
249 251parallel
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There are 12 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 62first strand
Strand 2
B
84 87parallel
Strand 3
B
125 128parallel
Strand 4
B
145 150parallel
Strand 5
B
177 181parallel
Strand 6
B
200 204parallel
Strand 7
B
221 226parallel
Strand 8
B
276 279parallel
Strand 9
B
298 302parallel
Strand 10
B
326 328parallel
Strand 11
B
348 350parallel
Strand 12
B
363 365parallel
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There are 3 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
210 212first strand
Strand 2
B
244 246parallel
Strand 3
B
287 289parallel
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There are 2 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
263 265first strand
Strand 2
B
270 272anti-parallel
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There are 3 strands in BF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
292 294first strand
Strand 2
B
315 317parallel
Strand 3
B
342 343parallel
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There are 3 strands in BG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
309 312first strand
Strand 2
B
336 339parallel
Strand 3
B
357 358parallel
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There are 7 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
30 31first strand
Strand 2
C
46 49parallel
Strand 3
C
67 69parallel
Strand 4
C
96 99parallel
Strand 5
C
132 135parallel
Strand 6
C
166 168parallel
Strand 7
C
189 191parallel
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There are 8 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
54 56first strand
Strand 2
C
74 76parallel
Strand 3
C
102 104parallel
Strand 4
C
138 140parallel
Strand 5
C
171 173parallel
Strand 6
C
194 196parallel
Strand 7
C
215 217parallel
Strand 8
C
249 251parallel
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There are 12 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
60 62first strand
Strand 2
C
84 87parallel
Strand 3
C
125 128parallel
Strand 4
C
145 150parallel
Strand 5
C
177 181parallel
Strand 6
C
200 204parallel
Strand 7
C
221 226parallel
Strand 8
C
276 279parallel
Strand 9
C
298 302parallel
Strand 10
C
326 328parallel
Strand 11
C
348 350parallel
Strand 12
C
363 365parallel
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There are 3 strands in CD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
210 212first strand
Strand 2
C
244 246parallel
Strand 3
C
287 289parallel
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There are 2 strands in CE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
263 265first strand
Strand 2
C
270 272anti-parallel
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There are 3 strands in CF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
292 294first strand
Strand 2
C
315 317parallel
Strand 3
C
342 343parallel
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There are 3 strands in CG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
309 312first strand
Strand 2
C
336 339parallel
Strand 3
C
357 358parallel
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There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
30 31first strand
Strand 2
D
46 49parallel
Strand 3
D
67 76anti-parallel
Strand 4
D
96 104parallel
Strand 5
D
138 140anti-parallel
Strand 6
D
171 173anti-parallel
Strand 7
D
194 196anti-parallel
Strand 8
D
215 217parallel
Strand 9
D
249 251anti-parallel
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There are 4 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
30 31first strand
Strand 2
D
46 49parallel
Strand 3
D
67 76anti-parallel
Strand 4
D
54 56parallel
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There are 15 strands in DC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
357 358first strand
Strand 2
D
336 339parallel
Strand 3
D
309 312parallel
Strand 4
D
287 289parallel
Strand 5
D
244 246parallel
Strand 6
D
210 212parallel
Strand 7
D
189 191parallel
Strand 8
D
166 168parallel
Strand 9
D
132 135parallel
Strand 10
D
96 104parallel
Strand 11
D
138 140anti-parallel
Strand 12
D
171 173anti-parallel
Strand 13
D
194 196anti-parallel
Strand 14
D
215 217parallel
Strand 15
D
249 251anti-parallel
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There are 13 strands in DD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
30 31first strand
Strand 2
D
46 49parallel
Strand 3
D
67 76anti-parallel
Strand 4
D
96 104parallel
Strand 5
D
132 135parallel
Strand 6
D
166 168parallel
Strand 7
D
189 191parallel
Strand 8
D
210 212parallel
Strand 9
D
244 246parallel
Strand 10
D
287 289parallel
Strand 11
D
309 312parallel
Strand 12
D
336 339parallel
Strand 13
D
357 358parallel
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There are 12 strands in DE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
357 358first strand
Strand 2
D
336 339parallel
Strand 3
D
309 312parallel
Strand 4
D
287 289parallel
Strand 5
D
244 246parallel
Strand 6
D
210 212parallel
Strand 7
D
189 191parallel
Strand 8
D
166 168parallel
Strand 9
D
132 135parallel
Strand 10
D
96 104parallel
Strand 11
D
67 76parallel
Strand 12
D
54 56parallel
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There are 12 strands in DF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
60 62first strand
Strand 2
D
84 87parallel
Strand 3
D
125 128parallel
Strand 4
D
145 150parallel
Strand 5
D
177 181parallel
Strand 6
D
200 204parallel
Strand 7
D
221 226parallel
Strand 8
D
276 279parallel
Strand 9
D
298 302parallel
Strand 10
D
326 328parallel
Strand 11
D
348 350parallel
Strand 12
D
363 365parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
263 265first strand
Strand 2
D
270 272anti-parallel
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There are 3 strands in DH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
292 294first strand
Strand 2
D
315 317parallel
Strand 3
D
342 343parallel
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There are 9 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
30 31first strand
Strand 2
E
46 49parallel
Strand 3
E
67 76parallel
Strand 4
E
96 104parallel
Strand 5
E
138 140anti-parallel
Strand 6
E
171 173anti-parallel
Strand 7
E
194 196anti-parallel
Strand 8
E
215 217parallel
Strand 9
E
249 251anti-parallel
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There are 4 strands in EB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
30 31first strand
Strand 2
E
46 49parallel
Strand 3
E
67 76parallel
Strand 4
E
54 56parallel
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There are 12 strands in EC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
287 289first strand
Strand 2
E
244 246parallel
Strand 3
E
210 212parallel
Strand 4
E
189 191parallel
Strand 5
E
166 168parallel
Strand 6
E
132 135parallel
Strand 7
E
96 104parallel
Strand 8
E
138 140anti-parallel
Strand 9
E
171 173anti-parallel
Strand 10
E
194 196anti-parallel
Strand 11
E
215 217parallel
Strand 12
E
249 251anti-parallel
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There are 10 strands in ED sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
30 31first strand
Strand 2
E
46 49parallel
Strand 3
E
67 76parallel
Strand 4
E
96 104parallel
Strand 5
E
132 135parallel
Strand 6
E
166 168parallel
Strand 7
E
189 191parallel
Strand 8
E
210 212parallel
Strand 9
E
244 246parallel
Strand 10
E
287 289parallel
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There are 9 strands in EE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
287 289first strand
Strand 2
E
244 246parallel
Strand 3
E
210 212parallel
Strand 4
E
189 191parallel
Strand 5
E
166 168parallel
Strand 6
E
132 135parallel
Strand 7
E
96 104parallel
Strand 8
E
67 76parallel
Strand 9
E
54 56parallel
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There are 12 strands in EF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
60 62first strand
Strand 2
E
84 87parallel
Strand 3
E
125 128parallel
Strand 4
E
145 150parallel
Strand 5
E
177 181parallel
Strand 6
E
200 204parallel
Strand 7
E
221 226parallel
Strand 8
E
276 279parallel
Strand 9
E
298 302parallel
Strand 10
E
326 328parallel
Strand 11
E
348 350parallel
Strand 12
E
363 365parallel
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There are 2 strands in EG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
263 266first strand
Strand 2
E
269 272anti-parallel
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There are 3 strands in EH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
292 294first strand
Strand 2
E
315 317parallel
Strand 3
E
342 343parallel
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There are 3 strands in EI sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
309 312first strand
Strand 2
E
336 339parallel
Strand 3
E
357 358parallel
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There are 10 strands in FA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
30 31first strand
Strand 2
F
46 49parallel
Strand 3
F
67 69parallel
Strand 4
F
96 99parallel
Strand 5
F
132 135parallel
Strand 6
F
166 168parallel
Strand 7
F
189 191parallel
Strand 8
F
210 212parallel
Strand 9
F
244 246parallel
Strand 10
F
287 289parallel
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There are 8 strands in FB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
54 56first strand
Strand 2
F
74 76parallel
Strand 3
F
102 104parallel
Strand 4
F
138 140parallel
Strand 5
F
171 173parallel
Strand 6
F
194 196parallel
Strand 7
F
215 217parallel
Strand 8
F
249 251parallel
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There are 12 strands in FC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
60 62first strand
Strand 2
F
84 87parallel
Strand 3
F
125 128parallel
Strand 4
F
145 150parallel
Strand 5
F
177 181parallel
Strand 6
F
200 204parallel
Strand 7
F
221 226parallel
Strand 8
F
276 279parallel
Strand 9
F
298 302parallel
Strand 10
F
326 328parallel
Strand 11
F
348 350parallel
Strand 12
F
363 365parallel
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There are 2 strands in FD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
263 265first strand
Strand 2
F
270 272anti-parallel
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There are 3 strands in FE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
292 294first strand
Strand 2
F
315 317parallel
Strand 3
F
342 343parallel
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There are 3 strands in FF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
309 312first strand
Strand 2
F
336 339parallel
Strand 3
F
357 358parallel
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