Analysis of interatomic Contacts of Structural Units in PDB entry:
5G6S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5G6S entry

There are 8 chains in PDB entry 5G6S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2VAL 290
B
 SER 2VAL 290
C
 LYS 3VAL 290
D
 LYS 3VAL 290
E
 LYS 3VAL 290
F
 SER 2VAL 290
G
 SER 2VAL 290
H
 SER 2VAL 290
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are116 helices in PDB entry 5G6S. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 24Right-handed alpha
Helix 2
2
A
34 37Right-handed 310
Helix 3
3
A
38 44Right-handed alpha
Helix 4
4
A
51 58Right-handed alpha
Helix 5
5
A
68 79Right-handed alpha
Helix 6
6
A
80 83Right-handed 310
Helix 7
7
A
95 109Right-handed alpha
Helix 8
8
A
121 125Right-handed 310
Helix 9
9
A
138 150Right-handed alpha
Helix 10
10
A
163 191Right-handed alpha
Helix 11
11
A
199 228Right-handed alpha
Helix 12
12
A
236 255Right-handed alpha
Helix 13
13
A
258 260Right-handed 310
Helix 14
14
A
261 274Right-handed alpha
Helix 15
15
A
280 288Right-handed 310
Helix 16
16
B
11 24Right-handed alpha
Helix 17
17
B
34 37Right-handed 310
Helix 18
18
B
38 44Right-handed alpha
Helix 19
19
B
51 58Right-handed alpha
Helix 20
20
B
68 79Right-handed alpha
Helix 21
21
B
95 109Right-handed alpha
Helix 22
22
B
121 125Right-handed 310
Helix 23
23
B
138 150Right-handed alpha
Helix 24
24
B
163 191Right-handed alpha
Helix 25
25
B
199 228Right-handed alpha
Helix 26
26
B
236 254Right-handed alpha
Helix 27
27
B
258 260Right-handed 310
Helix 28
28
B
261 274Right-handed alpha
Helix 29
29
B
280 288Right-handed 310
Helix 30
30
C
11 24Right-handed alpha
Helix 31
31
C
34 37Right-handed 310
Helix 32
32
C
38 44Right-handed alpha
Helix 33
33
C
51 58Right-handed alpha
Helix 34
34
C
68 79Right-handed alpha
Helix 35
35
C
80 83Right-handed 310
Helix 36
36
C
95 109Right-handed alpha
Helix 37
37
C
121 125Right-handed 310
Helix 38
38
C
138 150Right-handed alpha
Helix 39
39
C
163 191Right-handed alpha
Helix 40
40
C
199 228Right-handed alpha
Helix 41
41
C
236 254Right-handed alpha
Helix 42
42
C
258 260Right-handed 310
Helix 43
43
C
261 274Right-handed alpha
Helix 44
44
C
280 288Right-handed 310
Helix 45
45
D
11 24Right-handed alpha
Helix 46
46
D
34 37Right-handed 310
Helix 47
47
D
38 44Right-handed alpha
Helix 48
48
D
51 58Right-handed alpha
Helix 49
49
D
68 79Right-handed alpha
Helix 50
50
D
80 83Right-handed 310
Helix 51
51
D
95 109Right-handed alpha
Helix 52
52
D
121 125Right-handed 310
Helix 53
53
D
138 150Right-handed alpha
Helix 54
54
D
163 191Right-handed alpha
Helix 55
55
D
199 228Right-handed alpha
Helix 56
56
D
236 255Right-handed alpha
Helix 57
57
D
258 260Right-handed 310
Helix 58
58
D
261 274Right-handed alpha
Helix 59
59
D
280 288Right-handed 310
Helix 60
60
E
11 24Right-handed alpha
Helix 61
61
E
34 37Right-handed 310
Helix 62
62
E
38 44Right-handed alpha
Helix 63
63
E
51 58Right-handed alpha
Helix 64
64
E
68 79Right-handed alpha
Helix 65
65
E
80 83Right-handed 310
Helix 66
66
E
95 109Right-handed alpha
Helix 67
67
E
121 125Right-handed 310
Helix 68
68
E
138 150Right-handed alpha
Helix 69
69
E
163 191Right-handed alpha
Helix 70
70
E
199 228Right-handed alpha
Helix 71
71
E
236 254Right-handed alpha
Helix 72
72
E
258 260Right-handed 310
Helix 73
73
E
261 274Right-handed alpha
Helix 74
74
E
280 288Right-handed 310
Helix 75
75
F
11 24Right-handed alpha
Helix 76
76
F
34 37Right-handed 310
Helix 77
77
F
38 44Right-handed alpha
Helix 78
78
F
51 58Right-handed alpha
Helix 79
79
F
68 79Right-handed alpha
Helix 80
80
F
95 109Right-handed alpha
Helix 81
81
F
121 125Right-handed 310
Helix 82
82
F
138 150Right-handed alpha
Helix 83
83
F
163 191Right-handed alpha
Helix 84
84
F
199 228Right-handed alpha
Helix 85
85
F
236 254Right-handed alpha
Helix 86
86
F
258 260Right-handed 310
Helix 87
87
F
261 274Right-handed alpha
Helix 88
88
F
280 288Right-handed 310
Helix 89
89
G
11 24Right-handed alpha
Helix 90
90
G
34 37Right-handed 310
Helix 91
91
G
38 44Right-handed alpha
Helix 92
92
G
51 58Right-handed alpha
Helix 93
93
G
68 79Right-handed alpha
Helix 94
94
G
95 109Right-handed alpha
Helix 95
95
G
121 125Right-handed 310
Helix 96
96
G
138 150Right-handed alpha
Helix 97
97
G
163 191Right-handed alpha
Helix 98
98
G
199 228Right-handed alpha
Helix 99
99
G
236 254Right-handed alpha
Helix 100
100
G
258 260Right-handed 310
Helix 101
101
G
261 274Right-handed alpha
Helix 102
102
G
280 288Right-handed 310
Helix 103
103
H
11 24Right-handed alpha
Helix 104
104
H
34 37Right-handed 310
Helix 105
105
H
38 44Right-handed alpha
Helix 106
106
H
51 58Right-handed alpha
Helix 107
107
H
68 79Right-handed alpha
Helix 108
108
H
95 109Right-handed alpha
Helix 109
109
H
121 125Right-handed 310
Helix 110
110
H
138 150Right-handed alpha
Helix 111
111
H
163 191Right-handed alpha
Helix 112
112
H
199 228Right-handed alpha
Helix 113
113
H
236 254Right-handed alpha
Helix 114
114
H
258 260Right-handed 310
Helix 115
115
H
261 274Right-handed alpha
Helix 116
116
H
280 288Right-handed 310
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There are 8 sheets in PDB entry 5G6S. Click on sheet of interest to get list of strands forming it: AA, BA, CA, A, EA, FA, GA, HA,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 48first strand
Strand 2
A
27 31parallel
Strand 3
A
4 8parallel
Strand 4
A
61 64parallel
Strand 5
A
87 90parallel
Strand 6
A
112 119parallel
Strand 7
A
131 135anti-parallel
Strand 8
A
154 157parallel
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There are 8 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 48first strand
Strand 2
B
27 31parallel
Strand 3
B
4 8parallel
Strand 4
B
61 64parallel
Strand 5
B
87 90parallel
Strand 6
B
112 119parallel
Strand 7
B
131 135anti-parallel
Strand 8
B
154 157parallel
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There are 8 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
47 48first strand
Strand 2
C
27 31parallel
Strand 3
C
4 8parallel
Strand 4
C
61 64parallel
Strand 5
C
87 90parallel
Strand 6
C
112 119parallel
Strand 7
C
131 135anti-parallel
Strand 8
C
154 157parallel
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There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
47 48first strand
Strand 2
D
27 31parallel
Strand 3
D
4 8parallel
Strand 4
D
61 64parallel
Strand 5
D
87 90parallel
Strand 6
D
112 119parallel
Strand 7
D
131 135anti-parallel
Strand 8
D
154 157parallel
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There are 8 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
47 48first strand
Strand 2
E
27 31parallel
Strand 3
E
4 8parallel
Strand 4
E
61 64parallel
Strand 5
E
87 90parallel
Strand 6
E
112 119parallel
Strand 7
E
131 135anti-parallel
Strand 8
E
154 157parallel
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There are 8 strands in FA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
47 48first strand
Strand 2
F
27 31parallel
Strand 3
F
4 8parallel
Strand 4
F
61 64parallel
Strand 5
F
87 90parallel
Strand 6
F
112 119parallel
Strand 7
F
131 135anti-parallel
Strand 8
F
154 157parallel
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There are 8 strands in GA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
47 48first strand
Strand 2
G
27 31parallel
Strand 3
G
4 8parallel
Strand 4
G
61 64parallel
Strand 5
G
87 90parallel
Strand 6
G
112 119parallel
Strand 7
G
131 135anti-parallel
Strand 8
G
154 157parallel
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There are 8 strands in HA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
47 48first strand
Strand 2
H
27 31parallel
Strand 3
H
4 8parallel
Strand 4
H
61 64parallel
Strand 5
H
87 90parallel
Strand 6
H
112 119parallel
Strand 7
H
131 135anti-parallel
Strand 8
H
154 157parallel
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