Analysis of interatomic Contacts of Structural Units in PDB entry:
5GHK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5GHK entry

There is 1 chain in PDB entry 5GHK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 3VAL 584
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 5GHK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 15Right-handed alpha
Helix 2
AA2
A
15 32Right-handed alpha
Helix 3
AA3
A
35 56Right-handed alpha
Helix 4
AA4
A
65 77Right-handed alpha
Helix 5
AA5
A
88 93Right-handed 310
Helix 6
AA6
A
96 105Right-handed alpha
Helix 7
AA7
A
122 130Right-handed alpha
Helix 8
AA8
A
130 146Right-handed alpha
Helix 9
AA9
A
150 169Right-handed alpha
Helix 10
AB1
A
174 206Right-handed alpha
Helix 11
AB2
A
207 223Right-handed alpha
Helix 12
AB3
A
227 246Right-handed alpha
Helix 13
AB4
A
249 267Right-handed alpha
Helix 14
AB5
A
268 271Right-handed 310
Helix 15
AB6
A
273 281Right-handed 310
Helix 16
AB7
A
283 293Right-handed alpha
Helix 17
AB8
A
305 310Right-handed alpha
Helix 18
AB9
A
314 322Right-handed alpha
Helix 19
AC1
A
322 338Right-handed alpha
Helix 20
AC2
A
342 360Right-handed alpha
Helix 21
AC3
A
372 375Right-handed 310
Helix 22
AC4
A
376 415Right-handed alpha
Helix 23
AC5
A
419 437Right-handed alpha
Helix 24
AC6
A
441 443Right-handed 310
Helix 25
AC7
A
444 467Right-handed alpha
Helix 26
AC8
A
470 480Right-handed alpha
Helix 27
AC9
A
483 490Right-handed alpha
Helix 28
AD1
A
510 515Right-handed 310
Helix 29
AD2
A
517 534Right-handed alpha
Helix 30
AD3
A
540 560Right-handed alpha
Helix 31
AD4
A
566 569Right-handed 310
Helix 32
AD5
A
570 575Right-handed alpha
Helix 33
AD6
A
575 583Right-handed alpha
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There are no sheets in PDB entry 5GHK
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