Analysis of interatomic Contacts of Structural Units in PDB entry:
5GIY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5GIY entry

There is 1 chain in PDB entry 5GIY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 3LEU 583
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 5GIY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 15Right-handed alpha
Helix 2
AA2
A
15 31Right-handed alpha
Helix 3
AA3
A
35 56Right-handed alpha
Helix 4
AA4
A
65 75Right-handed alpha
Helix 5
AA5
A
76 78Right-handed 310
Helix 6
AA6
A
79 85Right-handed alpha
Helix 7
AA7
A
85 91Right-handed alpha
Helix 8
AA8
A
96 105Right-handed alpha
Helix 9
AA9
A
119 130Right-handed alpha
Helix 10
AB1
A
130 146Right-handed alpha
Helix 11
AB2
A
150 169Right-handed alpha
Helix 12
AB3
A
173 206Right-handed alpha
Helix 13
AB4
A
206 223Right-handed alpha
Helix 14
AB5
A
227 246Right-handed alpha
Helix 15
AB6
A
249 267Right-handed alpha
Helix 16
AB7
A
282 292Right-handed alpha
Helix 17
AB8
A
305 310Right-handed alpha
Helix 18
AB9
A
314 322Right-handed alpha
Helix 19
AC1
A
322 338Right-handed alpha
Helix 20
AC2
A
342 361Right-handed alpha
Helix 21
AC3
A
366 398Right-handed alpha
Helix 22
AC4
A
399 415Right-handed alpha
Helix 23
AC5
A
419 438Right-handed alpha
Helix 24
AC6
A
441 467Right-handed alpha
Helix 25
AC7
A
470 479Right-handed alpha
Helix 26
AC8
A
483 490Right-handed alpha
Helix 27
AC9
A
504 508Right-handed 310
Helix 28
AD1
A
510 515Right-handed 310
Helix 29
AD2
A
517 536Right-handed alpha
Helix 30
AD3
A
540 559Right-handed alpha
Helix 31
AD4
A
564 583Right-handed alpha
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There are no sheets in PDB entry 5GIY
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