Analysis of interatomic Contacts of Structural Units in PDB entry:
5GJU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5GJU entry

There is 1 chain in PDB entry 5GJU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 6ILE 210
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 5GJU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 12Right-handed 310
Helix 2
AA2
A
14 25Right-handed alpha
Helix 3
AA3
A
30 42Right-handed alpha
Helix 4
AA4
A
55 67Right-handed alpha
Helix 5
AA5
A
83 98Right-handed alpha
Helix 6
AA6
A
118 124Right-handed alpha
Helix 7
AA7
A
132 143Right-handed alpha
Helix 8
AA8
A
157 164Right-handed alpha
Helix 9
AA9
A
166 176Right-handed alpha
Helix 10
AB1
A
191 202Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5GJU.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 109first strand
Strand 2
A
128 131parallel
Strand 3
A
77 80parallel
Strand 4
A
152 156parallel
Strand 5
A
182 186parallel
Strand 6
A
46 48parallel
Strand 7
A
206 208parallel
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