Analysis of interatomic Contacts of Structural Units in PDB entry:
5GL7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5GL7 entry

There is 1 chain in PDB entry 5GL7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 226ALA 822
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 5GL7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
229 242Right-handed alpha
Helix 2
AA2
A
243 247Right-handed 310
Helix 3
AA3
A
280 287Right-handed alpha
Helix 4
AA4
A
287 301Right-handed alpha
Helix 5
AA5
A
315 325Right-handed alpha
Helix 6
AA6
A
328 347Right-handed alpha
Helix 7
AA7
A
359 375Right-handed alpha
Helix 8
AA8
A
397 399Right-handed 310
Helix 9
AA9
A
426 430Right-handed 310
Helix 10
AB1
A
453 469Right-handed alpha
Helix 11
AB2
A
475 489Right-handed alpha
Helix 12
AB3
A
516 521Right-handed alpha
Helix 13
AB4
A
523 533Right-handed alpha
Helix 14
AB5
A
536 541Right-handed alpha
Helix 15
AB6
A
556 562Right-handed alpha
Helix 16
AB7
A
562 572Right-handed alpha
Helix 17
AB8
A
606 611Right-handed 310
Helix 18
AB9
A
613 624Right-handed alpha
Helix 19
AC1
A
634 646Right-handed alpha
Helix 20
AC2
A
649 665Right-handed alpha
Helix 21
AC3
A
675 697Right-handed alpha
Helix 22
AC4
A
700 723Right-handed alpha
Helix 23
AC5
A
723 728Right-handed alpha
Helix 24
AC6
A
731 756Right-handed alpha
Helix 25
AC7
A
760 772Right-handed alpha
Helix 26
AC8
A
774 779Right-handed alpha
Helix 27
AC9
A
806 817Right-handed alpha
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There are 5 sheets in PDB entry 5GL7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
353 356first strand
Strand 2
A
304 311parallel
Strand 3
A
265 270parallel
Strand 4
A
546 553parallel
Strand 5
A
578 584parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
394 395first strand
Strand 2
A
379 389anti-parallel
Strand 3
A
443 452anti-parallel
Strand 4
A
493 494anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
413 414first strand
Strand 2
A
401 404anti-parallel
Strand 3
A
431 435anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
496 497first strand
Strand 2
A
514 515anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
587 589first strand
Strand 2
A
631 633parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il