Analysis of interatomic Contacts of Structural Units in PDB entry:
5GLG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5GLG entry

There is 1 chain in PDB entry 5GLG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 31TYR 501
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 5GLG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
43 58Right-handed alpha
Helix 2
AA2
A
73 77Right-handed 310
Helix 3
AA3
A
86 92Right-handed alpha
Helix 4
AA4
A
97 110Right-handed alpha
Helix 5
AA5
A
114 124Right-handed alpha
Helix 6
AA6
A
124 137Right-handed alpha
Helix 7
AA7
A
162 182Right-handed alpha
Helix 8
AA8
A
235 243Right-handed alpha
Helix 9
AA9
A
244 247Right-handed 310
Helix 10
AB1
A
259 269Right-handed alpha
Helix 11
AB2
A
301 306Right-handed alpha
Helix 12
AB3
A
325 337Right-handed alpha
Helix 13
AB4
A
349 356Right-handed alpha
Helix 14
AB5
A
356 366Right-handed alpha
Helix 15
AB6
A
374 381Right-handed alpha
Helix 16
AB7
A
386 399Right-handed alpha
Helix 17
AB8
A
480 501Right-handed alpha
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There are 6 sheets in PDB entry 5GLG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 189first strand
Strand 2
A
61 64parallel
Strand 3
A
37 40parallel
Strand 4
A
225 227parallel
Strand 5
A
462 464parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 82first strand
Strand 2
A
154 156anti-parallel
Strand 3
A
142 144anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
193 199first strand
Strand 2
A
205 211anti-parallel
Strand 3
A
217 221anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
272 273first strand
Strand 2
A
440 442anti-parallel
Strand 3
A
469 470parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
278 285first strand
Strand 2
A
424 437anti-parallel
Strand 3
A
344 348anti-parallel
Strand 4
A
309 311anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
278 285first strand
Strand 2
A
424 437anti-parallel
Strand 3
A
369 373anti-parallel
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