Analysis of interatomic Contacts of Structural Units in PDB entry:
5GNC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5GNC entry

There is 1 chain in PDB entry 5GNC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 74GLY 670
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 5GNC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
76 86Right-handed alpha
Helix 2
AA2
A
89 97Right-handed alpha
Helix 3
AA3
A
102 107Right-handed 310
Helix 4
AA4
A
111 123Right-handed alpha
Helix 5
AA5
A
125 141Right-handed alpha
Helix 6
AA6
A
142 156Right-handed alpha
Helix 7
AA7
A
159 177Right-handed alpha
Helix 8
AA8
A
180 188Right-handed alpha
Helix 9
AA9
A
193 200Right-handed 310
Helix 10
AB1
A
201 217Right-handed alpha
Helix 11
AB2
A
223 233Right-handed alpha
Helix 12
AB3
A
233 247Right-handed alpha
Helix 13
AB4
A
250 268Right-handed alpha
Helix 14
AB5
A
271 279Right-handed alpha
Helix 15
AB6
A
284 288Right-handed 310
Helix 16
AB7
A
291 308Right-handed alpha
Helix 17
AB8
A
314 320Right-handed alpha
Helix 18
AB9
A
324 338Right-handed alpha
Helix 19
AC1
A
341 360Right-handed alpha
Helix 20
AC2
A
362 370Right-handed alpha
Helix 21
AC3
A
371 382Right-handed 310
Helix 22
AC4
A
384 395Right-handed alpha
Helix 23
AC5
A
406 415Right-handed alpha
Helix 24
AC6
A
418 431Right-handed alpha
Helix 25
AC7
A
434 452Right-handed alpha
Helix 26
AC8
A
455 463Right-handed alpha
Helix 27
AC9
A
464 475Right-handed 310
Helix 28
AD1
A
476 490Right-handed alpha
Helix 29
AD2
A
499 507Right-handed alpha
Helix 30
AD3
A
509 522Right-handed alpha
Helix 31
AD4
A
522 543Right-handed alpha
Helix 32
AD5
A
546 554Right-handed alpha
Helix 33
AD6
A
566 582Right-handed alpha
Helix 34
AD7
A
589 599Right-handed alpha
Helix 35
AD8
A
599 612Right-handed alpha
Helix 36
AD9
A
616 634Right-handed alpha
Helix 37
AE1
A
637 646Right-handed alpha
Helix 38
AE2
A
650 670Right-handed alpha
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There are no sheets in PDB entry 5GNC
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