Analysis of interatomic Contacts of Structural Units in PDB entry:
5GOX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5GOX entry

There are 2 chains in PDB entry 5GOX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LYS 585LYS 765
B
LYS 585LYS 765
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 5GOX. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
585 633Right-handed alpha
Helix 2
AA2
A
637 674Right-handed alpha
Helix 3
AA3
A
690 705Right-handed alpha
Helix 4
AA4
A
707 732Right-handed alpha
Helix 5
AA5
A
732 745Right-handed alpha
Helix 6
AA6
A
745 765Right-handed alpha
Helix 7
AA7
B
586 633Right-handed alpha
Helix 8
AA8
B
637 674Right-handed alpha
Helix 9
AA9
B
690 705Right-handed alpha
Helix 10
AB1
B
707 733Right-handed alpha
Helix 11
AB2
B
735 745Right-handed alpha
Helix 12
AB3
B
745 765Right-handed alpha
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There are no sheets in PDB entry 5GOX

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