Analysis of interatomic Contacts of Structural Units in PDB entry:
5GWN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5GWN entry

There is 1 chain in PDB entry 5GWN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 90LEU 522
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 5GWN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
123 130Right-handed 310
Helix 2
AA2
A
144 146Right-handed 310
Helix 3
AA3
A
197 200Right-handed 310
Helix 4
AA4
A
281 285Right-handed 310
Helix 5
AA5
A
357 361Right-handed 310
Helix 6
AA6
A
377 381Right-handed 310
Helix 7
AA7
A
425 428Right-handed 310
Helix 8
AA8
A
479 482Right-handed 310
Helix 9
AA9
A
504 514Right-handed alpha
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There are 8 sheets in PDB entry 5GWN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
486 491first strand
Strand 2
A
495 501anti-parallel
Strand 3
A
104 111anti-parallel
Strand 4
A
135 142anti-parallel
Strand 5
A
516 517parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 154first strand
Strand 2
A
161 166anti-parallel
Strand 3
A
171 175anti-parallel
Strand 4
A
190 195anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
204 209first strand
Strand 2
A
213 218anti-parallel
Strand 3
A
223 229anti-parallel
Strand 4
A
240 248anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
256 261first strand
Strand 2
A
265 270anti-parallel
Strand 3
A
275 279anti-parallel
Strand 4
A
306 311anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
316 318first strand
Strand 2
A
324 326anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
332 337first strand
Strand 2
A
341 346anti-parallel
Strand 3
A
351 355anti-parallel
Strand 4
A
370 375anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
386 392first strand
Strand 2
A
395 400anti-parallel
Strand 3
A
405 409anti-parallel
Strand 4
A
418 423anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
432 437first strand
Strand 2
A
442 446anti-parallel
Strand 3
A
449 454anti-parallel
Strand 4
A
472 477anti-parallel
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