Analysis of interatomic Contacts of Structural Units in PDB entry:
5GZ4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5GZ4 entry

There is 1 chain in PDB entry 5GZ4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 34SER 851
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 5GZ4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
62 65Right-handed 310
Helix 2
AA2
A
66 75Right-handed alpha
Helix 3
AA3
A
108 113Right-handed alpha
Helix 4
AA4
A
150 158Right-handed alpha
Helix 5
AA5
A
161 171Right-handed alpha
Helix 6
AA6
A
184 195Right-handed alpha
Helix 7
AA7
A
197 202Right-handed alpha
Helix 8
AA8
A
226 230Right-handed 310
Helix 9
AA9
A
234 242Right-handed alpha
Helix 10
AB1
A
257 261Right-handed 310
Helix 11
AB2
A
274 288Right-handed alpha
Helix 12
AB3
A
304 312Right-handed alpha
Helix 13
AB4
A
315 339Right-handed alpha
Helix 14
AB5
A
367 369Right-handed 310
Helix 15
AB6
A
398 406Right-handed alpha
Helix 16
AB7
A
421 423Right-handed 310
Helix 17
AB8
A
424 428Right-handed 310
Helix 18
AB9
A
468 472Right-handed 310
Helix 19
AC1
A
495 505Right-handed alpha
Helix 20
AC2
A
518 522Right-handed 310
Helix 21
AC3
A
561 567Right-handed alpha
Helix 22
AC4
A
568 570Right-handed 310
Helix 23
AC5
A
572 583Right-handed alpha
Helix 24
AC6
A
648 652Right-handed 310
Helix 25
AC7
A
671 675Right-handed 310
Helix 26
AC8
A
678 683Right-handed alpha
Helix 27
AC9
A
686 688Right-handed 310
Helix 28
AD1
A
695 707Right-handed alpha
Helix 29
AD2
A
707 717Right-handed alpha
Helix 30
AD3
A
737 741Right-handed 310
Helix 31
AD4
A
774 776Right-handed 310
Helix 32
AD5
A
791 795Right-handed 310
Helix 33
AD6
A
803 811Right-handed alpha
Helix 34
AD7
A
815 824Right-handed alpha
Helix 35
AD8
A
834 844Right-handed alpha
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There are 10 sheets in PDB entry 5GZ4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
246 248first strand
Strand 2
A
296 301parallel
Strand 3
A
141 146parallel
Strand 4
A
346 350parallel
Strand 5
A
475 478anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 174first strand
Strand 2
A
486 488parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
177 178first strand
Strand 2
A
491 492parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
208 210first strand
Strand 2
A
215 217anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
356 358first strand
Strand 2
A
459 461anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
363 365first strand
Strand 2
A
447 449parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
376 378first strand
Strand 2
A
384 386anti-parallel
Strand 3
A
438 442anti-parallel
Strand 4
A
415 419anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
590 591first strand
Strand 2
A
825 826anti-parallel
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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
597 601first strand
Strand 2
A
606 610anti-parallel
Strand 3
A
615 623anti-parallel
Strand 4
A
719 726anti-parallel
Strand 5
A
755 763anti-parallel
Strand 6
A
778 786anti-parallel
Strand 7
A
813 814anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
664 668first strand
Strand 2
A
690 694anti-parallel
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