Analysis of interatomic Contacts of Structural Units in PDB entry:
5GZH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5GZH entry

There are 2 chains in PDB entry 5GZH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 24	HIS 449
B	LEU 24	HIS 449

There are 34 helices in PDB entry 5GZH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	25	39	Right-handed alpha
Helix 2	AA2	A	40	42	Right-handed 310
Helix 3	AA3	A	72	88	Right-handed alpha
Helix 4	AA4	A	92	110	Right-handed alpha
Helix 5	AA5	A	140	158	Right-handed alpha
Helix 6	AA6	A	161	178	Right-handed alpha
Helix 7	AA7	A	179	185	Right-handed 310
Helix 8	AA8	A	212	222	Right-handed alpha
Helix 9	AA9	A	228	235	Right-handed alpha
Helix 10	AB1	A	237	241	Right-handed 310
Helix 11	AB2	A	266	275	Right-handed 310
Helix 12	AB3	A	289	307	Right-handed alpha
Helix 13	AB4	A	346	351	Right-handed alpha
Helix 14	AB5	A	356	375	Right-handed alpha
Helix 15	AB6	A	398	414	Right-handed alpha
Helix 16	AB7	A	414	422	Right-handed alpha
Helix 17	AB8	A	423	433	Right-handed alpha
Helix 18	AB9	B	25	39	Right-handed alpha
Helix 19	AC1	B	40	42	Right-handed 310
Helix 20	AC2	B	72	88	Right-handed alpha
Helix 21	AC3	B	92	110	Right-handed alpha
Helix 22	AC4	B	140	158	Right-handed alpha
Helix 23	AC5	B	161	177	Right-handed alpha
Helix 24	AC6	B	179	185	Right-handed 310
Helix 25	AC7	B	212	222	Right-handed alpha
Helix 26	AC8	B	228	235	Right-handed alpha
Helix 27	AC9	B	237	241	Right-handed 310
Helix 28	AD1	B	266	275	Right-handed 310
Helix 29	AD2	B	289	307	Right-handed alpha
Helix 30	AD3	B	346	352	Right-handed alpha
Helix 31	AD4	B	356	375	Right-handed alpha
Helix 32	AD5	B	398	414	Right-handed alpha
Helix 33	AD6	B	414	422	Right-handed alpha
Helix 34	AD7	B	423	433	Right-handed alpha

There are 14 sheets in PDB entry 5GZH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	55	57	first strand
Strand 2	A	395	397	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	69	71	first strand
Strand 2	A	120	122	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	138	139	first strand
Strand 2	A	193	194	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	243	248	first strand
Strand 2	A	251	255	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	283	284	first strand
Strand 2	A	287	288	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	323	326	first strand
Strand 2	A	329	332	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	376	377	first strand
Strand 2	A	380	381	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	55	57	first strand
Strand 2	B	395	397	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	69	71	first strand
Strand 2	B	120	122	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	138	139	first strand
Strand 2	B	193	194	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	243	248	first strand
Strand 2	B	251	255	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	283	284	first strand
Strand 2	B	287	288	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	323	326	first strand
Strand 2	B	329	332	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	376	377	first strand
Strand 2	B	380	381	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5GZH

Analysis of interatomic Contacts of Structural Units in PDB entry:
5GZH