Analysis of interatomic Contacts of Structural Units in PDB entry:
5H00


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5H00 entry

There are 4 chains in PDB entry 5H00 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 10LEU 300
B
 HIS 9LEU 300
C
 LEU 12LEU 300
D
 PRO 15LEU 300
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 5H00. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
30 45Right-handed alpha
Helix 2
AA2
A
50 58Right-handed alpha
Helix 3
AA3
A
59 75Right-handed alpha
Helix 4
AA4
A
76 98Right-handed alpha
Helix 5
AA5
A
103 110Right-handed alpha
Helix 6
AA6
A
113 148Right-handed alpha
Helix 7
AA7
A
157 162Right-handed 310
Helix 8
AA8
A
184 198Right-handed alpha
Helix 9
AA9
A
203 210Right-handed alpha
Helix 10
AB1
A
212 224Right-handed alpha
Helix 11
AB2
A
229 249Right-handed alpha
Helix 12
AB3
A
257 264Right-handed alpha
Helix 13
AB4
A
267 299Right-handed alpha
Helix 14
AB5
B
30 45Right-handed alpha
Helix 15
AB6
B
50 59Right-handed alpha
Helix 16
AB7
B
59 75Right-handed alpha
Helix 17
AB8
B
76 98Right-handed alpha
Helix 18
AB9
B
103 111Right-handed alpha
Helix 19
AC1
B
113 148Right-handed alpha
Helix 20
AC2
B
157 162Right-handed 310
Helix 21
AC3
B
185 198Right-handed alpha
Helix 22
AC4
B
203 210Right-handed alpha
Helix 23
AC5
B
212 224Right-handed alpha
Helix 24
AC6
B
225 227Right-handed 310
Helix 25
AC7
B
229 248Right-handed alpha
Helix 26
AC8
B
257 265Right-handed alpha
Helix 27
AC9
B
267 299Right-handed alpha
Helix 28
AD1
C
30 45Right-handed alpha
Helix 29
AD2
C
50 57Right-handed alpha
Helix 30
AD3
C
59 75Right-handed alpha
Helix 31
AD4
C
76 98Right-handed alpha
Helix 32
AD5
C
103 111Right-handed alpha
Helix 33
AD6
C
113 148Right-handed alpha
Helix 34
AD7
C
157 162Right-handed 310
Helix 35
AD8
C
185 197Right-handed alpha
Helix 36
AD9
C
203 210Right-handed alpha
Helix 37
AE1
C
212 224Right-handed alpha
Helix 38
AE2
C
225 227Right-handed 310
Helix 39
AE3
C
229 249Right-handed alpha
Helix 40
AE4
C
257 265Right-handed alpha
Helix 41
AE5
C
267 299Right-handed alpha
Helix 42
AE6
D
30 45Right-handed alpha
Helix 43
AE7
D
50 57Right-handed alpha
Helix 44
AE8
D
59 75Right-handed alpha
Helix 45
AE9
D
76 98Right-handed alpha
Helix 46
AF1
D
103 110Right-handed alpha
Helix 47
AF2
D
113 148Right-handed alpha
Helix 48
AF3
D
157 162Right-handed 310
Helix 49
AF4
D
184 198Right-handed alpha
Helix 50
AF5
D
203 210Right-handed alpha
Helix 51
AF6
D
212 224Right-handed alpha
Helix 52
AF7
D
225 227Right-handed 310
Helix 53
AF8
D
229 249Right-handed alpha
Helix 54
AF9
D
257 265Right-handed alpha
Helix 55
AG1
D
267 299Right-handed alpha
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There are no sheets in PDB entry 5H00
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il