Analysis of interatomic Contacts of Structural Units in PDB entry:
5H0I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5H0I entry

There are 2 chains in PDB entry 5H0I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 55SER 472
B
 VAL 54SER 472
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 5H0I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
67 69Right-handed 310
Helix 2
AA2
A
70 88Right-handed alpha
Helix 3
AA3
A
90 92Right-handed 310
Helix 4
AA4
A
132 136Right-handed 310
Helix 5
AA5
A
137 147Right-handed alpha
Helix 6
AA6
A
148 152Right-handed 310
Helix 7
AA7
A
191 204Right-handed alpha
Helix 8
AA8
A
218 223Right-handed 310
Helix 9
AA9
A
268 280Right-handed alpha
Helix 10
AB1
A
286 299Right-handed alpha
Helix 11
AB2
A
310 316Right-handed 310
Helix 12
AB3
A
317 322Right-handed alpha
Helix 13
AB4
A
349 362Right-handed alpha
Helix 14
AB5
A
366 399Right-handed alpha
Helix 15
AB6
A
405 409Right-handed 310
Helix 16
AB7
A
420 436Right-handed alpha
Helix 17
AB8
A
441 444Right-handed 310
Helix 18
AB9
A
445 455Right-handed alpha
Helix 19
AC1
A
458 470Right-handed alpha
Helix 20
AC2
B
67 69Right-handed 310
Helix 21
AC3
B
70 87Right-handed alpha
Helix 22
AC4
B
90 92Right-handed 310
Helix 23
AC5
B
132 136Right-handed 310
Helix 24
AC6
B
137 147Right-handed alpha
Helix 25
AC7
B
148 152Right-handed 310
Helix 26
AC8
B
191 204Right-handed alpha
Helix 27
AC9
B
218 223Right-handed 310
Helix 28
AD1
B
268 280Right-handed alpha
Helix 29
AD2
B
286 299Right-handed alpha
Helix 30
AD3
B
310 316Right-handed 310
Helix 31
AD4
B
317 322Right-handed alpha
Helix 32
AD5
B
349 362Right-handed alpha
Helix 33
AD6
B
366 399Right-handed alpha
Helix 34
AD7
B
420 435Right-handed alpha
Helix 35
AD8
B
441 444Right-handed 310
Helix 36
AD9
B
445 455Right-handed alpha
Helix 37
AE1
B
458 470Right-handed alpha
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There are 6 sheets in PDB entry 5H0I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 97first strand
Strand 2
A
57 63parallel
Strand 3
A
167 173parallel
Strand 4
A
209 215parallel
Strand 5
A
233 237parallel
Strand 6
A
305 308anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
176 177first strand
Strand 2
A
180 181anti-parallel
Strand 3
A
189 190anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
266 267first strand
Strand 2
A
246 248anti-parallel
Strand 3
A
345 346anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
94 97first strand
Strand 2
B
57 63parallel
Strand 3
B
167 173parallel
Strand 4
B
209 215parallel
Strand 5
B
233 237parallel
Strand 6
B
305 308anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
176 177first strand
Strand 2
B
180 181anti-parallel
Strand 3
B
189 190anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
266 267first strand
Strand 2
B
246 248anti-parallel
Strand 3
B
345 346anti-parallel
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