Analysis of interatomic Contacts of Structural Units in PDB entry:
5H0S

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5H0S entry

There are 2 chains in PDB entry 5H0S (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	THR 134	ALA 1333
C	ALA 73	ALA 1333

There are 78 helices in PDB entry 5H0S. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	183	197	Right-handed alpha
Helix 2	AA2	B	214	217	Right-handed 310
Helix 3	AA3	B	242	260	Right-handed alpha
Helix 4	AA4	B	274	278	Right-handed 310
Helix 5	AA5	B	279	286	Right-handed alpha
Helix 6	AA6	B	297	302	Right-handed 310
Helix 7	AA7	B	307	318	Right-handed alpha
Helix 8	AA8	B	351	369	Right-handed alpha
Helix 9	AA9	B	372	381	Right-handed alpha
Helix 10	AB1	B	404	419	Right-handed alpha
Helix 11	AB2	B	421	435	Right-handed alpha
Helix 12	AB3	B	456	458	Right-handed 310
Helix 13	AB4	B	459	471	Right-handed alpha
Helix 14	AB5	B	477	487	Right-handed alpha
Helix 15	AB6	B	508	521	Right-handed alpha
Helix 16	AB7	B	521	544	Right-handed alpha
Helix 17	AB8	B	544	555	Right-handed alpha
Helix 18	AB9	B	576	581	Right-handed alpha
Helix 19	AC1	B	588	590	Right-handed 310
Helix 20	AC2	B	597	606	Right-handed alpha
Helix 21	AC3	B	616	623	Right-handed alpha
Helix 22	AC4	B	646	671	Right-handed alpha
Helix 23	AC5	B	673	711	Right-handed alpha
Helix 24	AC6	B	759	761	Right-handed 310
Helix 25	AC7	B	762	769	Right-handed alpha
Helix 26	AC8	B	795	814	Right-handed alpha
Helix 27	AC9	B	814	824	Right-handed alpha
Helix 28	AD1	B	852	858	Right-handed alpha
Helix 29	AD2	B	858	866	Right-handed alpha
Helix 30	AD3	B	879	890	Right-handed alpha
Helix 31	AD4	B	902	913	Right-handed alpha
Helix 32	AD5	B	948	952	Right-handed alpha
Helix 33	AD6	B	961	970	Right-handed alpha
Helix 34	AD7	B	977	988	Right-handed alpha
Helix 35	AD8	B	997	1004	Right-handed alpha
Helix 36	AD9	B	1037	1041	Right-handed 310
Helix 37	AE1	B	1043	1047	Right-handed 310
Helix 38	AE2	B	1048	1063	Right-handed alpha
Helix 39	AE3	B	1148	1163	Right-handed alpha
Helix 40	AE4	B	1191	1196	Right-handed alpha
Helix 41	AE5	B	1324	1328	Right-handed 310
Helix 42	AE6	C	184	189	Right-handed alpha
Helix 43	AE7	C	214	218	Right-handed 310
Helix 44	AE8	C	244	249	Right-handed alpha
Helix 45	AE9	C	253	260	Right-handed alpha
Helix 46	AF1	C	274	278	Right-handed 310
Helix 47	AF2	C	279	284	Right-handed alpha
Helix 48	AF3	C	307	320	Right-handed alpha
Helix 49	AF4	C	351	368	Right-handed alpha
Helix 50	AF5	C	371	383	Right-handed alpha
Helix 51	AF6	C	404	419	Right-handed alpha
Helix 52	AF7	C	420	437	Right-handed alpha
Helix 53	AF8	C	456	469	Right-handed alpha
Helix 54	AF9	C	475	483	Right-handed alpha
Helix 55	AG1	C	504	506	Right-handed 310
Helix 56	AG2	C	507	521	Right-handed alpha
Helix 57	AG3	C	521	528	Right-handed alpha
Helix 58	AG4	C	528	544	Right-handed alpha
Helix 59	AG5	C	544	554	Right-handed alpha
Helix 60	AG6	C	588	591	Right-handed 310
Helix 61	AG7	C	597	605	Right-handed alpha
Helix 62	AG8	C	616	622	Right-handed alpha
Helix 63	AG9	C	646	659	Right-handed alpha
Helix 64	AH1	C	660	663	Right-handed 310
Helix 65	AH2	C	672	699	Right-handed alpha
Helix 66	AH3	C	701	710	Right-handed alpha
Helix 67	AH4	C	723	727	Right-handed 310
Helix 68	AH5	C	759	761	Right-handed 310
Helix 69	AH6	C	762	769	Right-handed alpha
Helix 70	AH7	C	795	824	Right-handed alpha
Helix 71	AH8	C	852	865	Right-handed alpha
Helix 72	AH9	C	881	890	Right-handed alpha
Helix 73	AI1	C	903	912	Right-handed alpha
Helix 74	AI2	C	962	971	Right-handed alpha
Helix 75	AI3	C	976	990	Right-handed alpha
Helix 76	AI4	C	1037	1041	Right-handed 310
Helix 77	AI5	C	1050	1064	Right-handed alpha
Helix 78	AI6	C	1150	1162	Right-handed alpha

There are 24 sheets in PDB entry 5H0S. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	164	170	first strand
Strand 2	B	201	208	anti-parallel
Strand 3	B	1242	1243	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	219	220	first strand
Strand 2	B	227	228	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	328	334	first strand
Strand 2	B	341	348	anti-parallel
Strand 3	B	1300	1305	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	370	371	first strand
Strand 2	B	399	400	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	388	389	first strand
Strand 2	B	1319	1320	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	494	495	first strand
Strand 2	B	757	758	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	566	567	first strand
Strand 2	B	557	560	anti-parallel
Strand 3	B	585	586	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	612	615	first strand
Strand 2	B	632	635	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	742	743	first strand
Strand 2	B	732	735	anti-parallel
Strand 3	B	1018	1023	anti-parallel
Strand 4	B	1026	1029	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	894	895	first strand
Strand 2	B	916	919	parallel
Strand 3	B	847	851	parallel
Strand 4	B	829	835	anti-parallel
Strand 5	B	941	947	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1098	1100	first strand
Strand 2	B	1138	1141	parallel
Strand 3	B	1165	1178	parallel
Strand 4	B	1201	1207	parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1098	1100	first strand
Strand 2	B	1138	1141	parallel
Strand 3	B	1165	1178	parallel
Strand 4	B	1071	1080	anti-parallel
Strand 5	B	1227	1231	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1106	1110	first strand
Strand 2	B	1115	1119	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	78	82	first strand
Strand 2	C	164	171	anti-parallel
Strand 3	C	201	208	anti-parallel
Strand 4	C	1243	1245	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	146	147	first strand
Strand 2	C	1316	1317	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	388	389	first strand
Strand 2	C	1319	1320	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	566	568	first strand
Strand 2	C	557	560	anti-parallel
Strand 3	C	585	586	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	613	615	first strand
Strand 2	C	632	634	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	741	743	first strand
Strand 2	C	732	735	anti-parallel
Strand 3	C	1018	1023	anti-parallel
Strand 4	C	1027	1028	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	895	896	first strand
Strand 2	C	917	919	parallel
Strand 3	C	848	851	parallel
Strand 4	C	833	834	anti-parallel
Strand 5	C	943	944	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1000	1001	first strand
Strand 2	C	1007	1008	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1074	1079	first strand
Strand 2	C	1228	1232	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1106	1107	first strand
Strand 2	C	1118	1119	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1174	1175	first strand
Strand 2	C	1203	1204	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5H0S

Analysis of interatomic Contacts of Structural Units in PDB entry:
5H0S