Analysis of interatomic Contacts of Structural Units in PDB entry:
5H11


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5H11 entry

There is 1 chain in PDB entry 5H11 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -4SER 708
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 5H11. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
-1 195Right-handed 310
Helix 2
AA2
A
196 206Right-handed alpha
Helix 3
AA3
A
210 220Right-handed alpha
Helix 4
AA4
A
224 239Right-handed alpha
Helix 5
AA5
A
245 265Right-handed alpha
Helix 6
AA6
A
267 282Right-handed alpha
Helix 7
AA7
A
282 297Right-handed alpha
Helix 8
AA8
A
299 322Right-handed alpha
Helix 9
AA9
A
329 340Right-handed alpha
Helix 10
AB1
A
348 371Right-handed alpha
Helix 11
AB2
A
412 434Right-handed alpha
Helix 12
AB3
A
438 454Right-handed alpha
Helix 13
AB4
A
458 468Right-handed alpha
Helix 14
AB5
A
480 503Right-handed alpha
Helix 15
AB6
A
504 509Right-handed alpha
Helix 16
AB7
A
513 555Right-handed alpha
Helix 17
AB8
A
556 560Right-handed 310
Helix 18
AB9
A
573 592Right-handed alpha
Helix 19
AC1
A
595 618Right-handed alpha
Helix 20
AC2
A
619 621Right-handed 310
Helix 21
AC3
A
624 644Right-handed alpha
Helix 22
AC4
A
647 661Right-handed alpha
Helix 23
AC5
A
662 665Right-handed 310
Helix 24
AC6
A
667 669Right-handed 310
Helix 25
AC7
A
670 675Right-handed alpha
Helix 26
AC8
A
677 682Right-handed alpha
Helix 27
AC9
A
684 693Right-handed alpha
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There are no sheets in PDB entry 5H11
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il