Analysis of interatomic Contacts of Structural Units in PDB entry:
5H1Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5H1Y entry

There are 2 chains in PDB entry 5H1Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 157VAL 398
B
 SER 154VAL 398
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 5H1Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
158 167Right-handed alpha
Helix 2
AA2
A
189 198Right-handed alpha
Helix 3
AA3
A
205 217Right-handed alpha
Helix 4
AA4
A
230 250Right-handed alpha
Helix 5
AA5
A
266 286Right-handed alpha
Helix 6
AA6
A
302 311Right-handed alpha
Helix 7
AA7
A
320 330Right-handed alpha
Helix 8
AA8
A
345 352Right-handed alpha
Helix 9
AA9
A
354 363Right-handed alpha
Helix 10
AB1
A
379 390Right-handed alpha
Helix 11
AB2
B
155 167Right-handed alpha
Helix 12
AB3
B
189 198Right-handed alpha
Helix 13
AB4
B
205 217Right-handed alpha
Helix 14
AB5
B
230 250Right-handed alpha
Helix 15
AB6
B
266 286Right-handed alpha
Helix 16
AB7
B
302 312Right-handed alpha
Helix 17
AB8
B
320 330Right-handed alpha
Helix 18
AB9
B
345 352Right-handed alpha
Helix 19
AC1
B
354 363Right-handed alpha
Helix 20
AC2
B
379 390Right-handed alpha
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There are 2 sheets in PDB entry 5H1Y. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
170 172first strand
Strand 2
A
394 397anti-parallel
Strand 3
A
221 224parallel
Strand 4
A
370 375parallel
Strand 5
A
340 343parallel
Strand 6
A
260 263parallel
Strand 7
A
316 319parallel
Strand 8
A
294 297parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
170 172first strand
Strand 2
B
394 397anti-parallel
Strand 3
B
221 224parallel
Strand 4
B
370 374parallel
Strand 5
B
340 343parallel
Strand 6
B
260 263parallel
Strand 7
B
316 319parallel
Strand 8
B
294 297parallel
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