Analysis of interatomic Contacts of Structural Units in PDB entry:
5H1Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5H1Z entry

There is 1 chain in PDB entry 5H1Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 7ARG 406
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 5H1Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 21Right-handed alpha
Helix 2
AA2
A
24 35Right-handed alpha
Helix 3
AA3
A
53 62Right-handed alpha
Helix 4
AA4
A
90 94Right-handed 310
Helix 5
AA5
A
97 105Right-handed alpha
Helix 6
AA6
A
106 110Right-handed 310
Helix 7
AA7
A
111 133Right-handed alpha
Helix 8
AA8
A
141 145Right-handed alpha
Helix 9
AA9
A
147 158Right-handed alpha
Helix 10
AB1
A
164 170Right-handed 310
Helix 11
AB2
A
189 208Right-handed alpha
Helix 12
AB3
A
218 222Right-handed 310
Helix 13
AB4
A
234 246Right-handed alpha
Helix 14
AB5
A
247 264Right-handed alpha
Helix 15
AB6
A
264 274Right-handed alpha
Helix 16
AB7
A
277 290Right-handed alpha
Helix 17
AB8
A
320 324Right-handed alpha
Helix 18
AB9
A
340 346Right-handed 310
Helix 19
AC1
A
351 355Right-handed 310
Helix 20
AC2
A
358 377Right-handed alpha
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There are 5 sheets in PDB entry 5H1Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 40first strand
Strand 2
A
48 51anti-parallel
Strand 3
A
316 319parallel
Strand 4
A
294 295anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 68first strand
Strand 2
A
298 299anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 140first strand
Strand 2
A
401 404anti-parallel
Strand 3
A
380 382anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
303 305first strand
Strand 2
A
308 310anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
387 388first strand
Strand 2
A
397 399anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il