Analysis of interatomic Contacts of Structural Units in PDB entry:
5H3O

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5H3O entry

There are 4 chains in PDB entry 5H3O (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 106	ASP 620
B	ARG 106	ASP 620
C	ARG 106	ASP 620
D	ARG 106	ASP 620

There are 84 helices in PDB entry 5H3O. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	106	110	Right-handed 310
Helix 2	AA2	A	118	145	Right-handed alpha
Helix 3	AA3	A	198	224	Right-handed alpha
Helix 4	AA4	A	237	247	Right-handed alpha
Helix 5	AA5	A	247	257	Right-handed alpha
Helix 6	AA6	A	261	266	Right-handed alpha
Helix 7	AA7	A	276	285	Right-handed 310
Helix 8	AA8	A	286	299	Right-handed alpha
Helix 9	AA9	A	303	334	Right-handed alpha
Helix 10	AB1	A	358	375	Right-handed alpha
Helix 11	AB2	A	385	417	Right-handed alpha
Helix 12	AB3	A	418	438	Right-handed alpha
Helix 13	AB4	A	441	458	Right-handed alpha
Helix 14	AB5	A	464	471	Right-handed alpha
Helix 15	AB6	A	472	490	Right-handed alpha
Helix 16	AB7	A	491	497	Right-handed alpha
Helix 17	AB8	A	501	506	Right-handed alpha
Helix 18	AB9	A	507	509	Right-handed 310
Helix 19	AC1	A	559	564	Right-handed alpha
Helix 20	AC2	A	592	600	Right-handed alpha
Helix 21	AC3	A	602	619	Right-handed alpha
Helix 22	AC4	B	106	110	Right-handed 310
Helix 23	AC5	B	118	145	Right-handed alpha
Helix 24	AC6	B	198	224	Right-handed alpha
Helix 25	AC7	B	237	247	Right-handed alpha
Helix 26	AC8	B	247	257	Right-handed alpha
Helix 27	AC9	B	261	266	Right-handed alpha
Helix 28	AD1	B	276	285	Right-handed 310
Helix 29	AD2	B	286	299	Right-handed alpha
Helix 30	AD3	B	303	334	Right-handed alpha
Helix 31	AD4	B	358	375	Right-handed alpha
Helix 32	AD5	B	385	417	Right-handed alpha
Helix 33	AD6	B	418	438	Right-handed alpha
Helix 34	AD7	B	441	458	Right-handed alpha
Helix 35	AD8	B	464	471	Right-handed alpha
Helix 36	AD9	B	472	490	Right-handed alpha
Helix 37	AE1	B	491	497	Right-handed alpha
Helix 38	AE2	B	501	506	Right-handed alpha
Helix 39	AE3	B	507	509	Right-handed 310
Helix 40	AE4	B	559	564	Right-handed alpha
Helix 41	AE5	B	592	600	Right-handed alpha
Helix 42	AE6	B	602	619	Right-handed alpha
Helix 43	AE7	C	106	110	Right-handed 310
Helix 44	AE8	C	118	145	Right-handed alpha
Helix 45	AE9	C	198	224	Right-handed alpha
Helix 46	AF1	C	237	247	Right-handed alpha
Helix 47	AF2	C	247	257	Right-handed alpha
Helix 48	AF3	C	261	266	Right-handed alpha
Helix 49	AF4	C	276	285	Right-handed 310
Helix 50	AF5	C	286	299	Right-handed alpha
Helix 51	AF6	C	303	334	Right-handed alpha
Helix 52	AF7	C	358	375	Right-handed alpha
Helix 53	AF8	C	385	417	Right-handed alpha
Helix 54	AF9	C	418	438	Right-handed alpha
Helix 55	AG1	C	441	458	Right-handed alpha
Helix 56	AG2	C	464	471	Right-handed alpha
Helix 57	AG3	C	472	490	Right-handed alpha
Helix 58	AG4	C	491	497	Right-handed alpha
Helix 59	AG5	C	501	506	Right-handed alpha
Helix 60	AG6	C	507	509	Right-handed 310
Helix 61	AG7	C	559	564	Right-handed alpha
Helix 62	AG8	C	592	600	Right-handed alpha
Helix 63	AG9	C	602	618	Right-handed alpha
Helix 64	AH1	D	106	110	Right-handed 310
Helix 65	AH2	D	118	145	Right-handed alpha
Helix 66	AH3	D	198	224	Right-handed alpha
Helix 67	AH4	D	237	247	Right-handed alpha
Helix 68	AH5	D	247	257	Right-handed alpha
Helix 69	AH6	D	261	266	Right-handed alpha
Helix 70	AH7	D	276	285	Right-handed 310
Helix 71	AH8	D	286	299	Right-handed alpha
Helix 72	AH9	D	303	334	Right-handed alpha
Helix 73	AI1	D	358	375	Right-handed alpha
Helix 74	AI2	D	385	417	Right-handed alpha
Helix 75	AI3	D	418	438	Right-handed alpha
Helix 76	AI4	D	441	458	Right-handed alpha
Helix 77	AI5	D	464	471	Right-handed alpha
Helix 78	AI6	D	472	490	Right-handed alpha
Helix 79	AI7	D	491	497	Right-handed alpha
Helix 80	AI8	D	501	506	Right-handed alpha
Helix 81	AI9	D	507	509	Right-handed 310
Helix 82	AJ1	D	559	564	Right-handed alpha
Helix 83	AJ2	D	592	600	Right-handed alpha
Helix 84	AJ3	D	602	619	Right-handed alpha

There are 16 sheets in PDB entry 5H3O. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	153	154	first strand
Strand 2	A	187	188	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	228	229	first strand
Strand 2	A	232	233	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	510	514	first strand
Strand 2	A	585	591	anti-parallel
Strand 3	A	529	535	anti-parallel
Strand 4	A	557	558	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	550	552	first strand
Strand 2	A	538	541	anti-parallel
Strand 3	A	578	581	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	153	154	first strand
Strand 2	B	187	188	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	228	229	first strand
Strand 2	B	232	233	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	510	514	first strand
Strand 2	B	585	591	anti-parallel
Strand 3	B	529	535	anti-parallel
Strand 4	B	557	558	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	550	552	first strand
Strand 2	B	538	541	anti-parallel
Strand 3	B	578	581	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	153	154	first strand
Strand 2	C	187	188	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	228	229	first strand
Strand 2	C	232	233	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	510	514	first strand
Strand 2	C	585	591	anti-parallel
Strand 3	C	529	535	anti-parallel
Strand 4	C	557	558	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	550	552	first strand
Strand 2	C	538	541	anti-parallel
Strand 3	C	578	581	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	153	154	first strand
Strand 2	D	187	188	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	228	229	first strand
Strand 2	D	232	233	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	510	514	first strand
Strand 2	D	585	591	anti-parallel
Strand 3	D	529	535	anti-parallel
Strand 4	D	557	558	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	550	552	first strand
Strand 2	D	538	541	anti-parallel
Strand 3	D	578	581	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5H3O

Analysis of interatomic Contacts of Structural Units in PDB entry:
5H3O