Analysis of interatomic Contacts of Structural Units in PDB entry:
5H5T

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5H5T entry

There are 5 chains in PDB entry 5H5T (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 72	LYS 267
B	SER 72	THR 266
C	SER 72	LYS 267
D	VAL 74	THR 266
E	SER 72	LYS 267

There are 15 helices in PDB entry 5H5T. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	152	163	Right-handed alpha
Helix 2	AA2	A	189	192	Right-handed 310
Helix 3	AA3	A	200	208	Right-handed alpha
Helix 4	AA4	B	152	164	Right-handed alpha
Helix 5	AA5	B	189	192	Right-handed 310
Helix 6	AA6	B	200	208	Right-handed alpha
Helix 7	AA7	C	152	164	Right-handed alpha
Helix 8	AA8	C	188	192	Right-handed 310
Helix 9	AA9	C	200	208	Right-handed alpha
Helix 10	AB1	D	152	164	Right-handed alpha
Helix 11	AB2	D	188	192	Right-handed 310
Helix 12	AB3	D	200	208	Right-handed alpha
Helix 13	AB4	E	152	164	Right-handed alpha
Helix 14	AB5	E	189	192	Right-handed 310
Helix 15	AB6	E	200	208	Right-handed alpha

There are 20 sheets in PDB entry 5H5T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	74	77	first strand
Strand 2	A	258	266	anti-parallel
Strand 3	A	93	101	anti-parallel
Strand 4	A	227	231	anti-parallel
Strand 5	A	234	238	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	82	86	first strand
Strand 2	A	250	254	anti-parallel
Strand 3	A	242	243	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	167	175	first strand
Strand 2	A	178	187	anti-parallel
Strand 3	A	105	110	anti-parallel
Strand 4	A	218	222	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	142	146	first strand
Strand 2	A	129	134	anti-parallel
Strand 3	A	194	198	anti-parallel
Strand 4	A	209	210	anti-parallel
Strand 5	A	215	216	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	74	77	first strand
Strand 2	B	258	266	anti-parallel
Strand 3	B	93	101	anti-parallel
Strand 4	B	227	231	anti-parallel
Strand 5	B	234	238	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	82	86	first strand
Strand 2	B	250	254	anti-parallel
Strand 3	B	242	244	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	168	175	first strand
Strand 2	B	178	187	anti-parallel
Strand 3	B	105	110	anti-parallel
Strand 4	B	218	222	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	142	147	first strand
Strand 2	B	128	134	anti-parallel
Strand 3	B	194	198	anti-parallel
Strand 4	B	209	210	anti-parallel
Strand 5	B	215	216	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	74	77	first strand
Strand 2	C	258	266	anti-parallel
Strand 3	C	93	101	anti-parallel
Strand 4	C	227	231	anti-parallel
Strand 5	C	234	238	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	82	86	first strand
Strand 2	C	250	254	anti-parallel
Strand 3	C	242	243	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	167	175	first strand
Strand 2	C	178	185	anti-parallel
Strand 3	C	107	110	anti-parallel
Strand 4	C	218	222	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	142	145	first strand
Strand 2	C	130	134	anti-parallel
Strand 3	C	194	198	anti-parallel
Strand 4	C	209	210	anti-parallel
Strand 5	C	215	216	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	75	77	first strand
Strand 2	D	258	265	anti-parallel
Strand 3	D	93	101	anti-parallel
Strand 4	D	227	231	anti-parallel
Strand 5	D	234	238	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	82	85	first strand
Strand 2	D	251	254	anti-parallel
Strand 3	D	242	243	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	167	175	first strand
Strand 2	D	178	185	anti-parallel
Strand 3	D	107	110	anti-parallel
Strand 4	D	218	222	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	142	146	first strand
Strand 2	D	129	134	anti-parallel
Strand 3	D	194	198	anti-parallel
Strand 4	D	209	210	anti-parallel
Strand 5	D	215	216	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	74	77	first strand
Strand 2	E	258	266	anti-parallel
Strand 3	E	93	101	anti-parallel
Strand 4	E	227	231	anti-parallel
Strand 5	E	234	238	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	82	86	first strand
Strand 2	E	250	254	anti-parallel
Strand 3	E	242	243	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	167	175	first strand
Strand 2	E	178	187	anti-parallel
Strand 3	E	105	110	anti-parallel
Strand 4	E	218	222	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	142	146	first strand
Strand 2	E	129	134	anti-parallel
Strand 3	E	194	198	anti-parallel
Strand 4	E	209	210	anti-parallel
Strand 5	E	215	216	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5H5T

Analysis of interatomic Contacts of Structural Units in PDB entry:
5H5T