Analysis of interatomic Contacts of Structural Units in PDB entry:
5H5X

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5H5X entry

There are 12 chains in PDB entry 5H5X (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 11	VAL 263
B	THR 11	VAL 263
C	THR 7	VAL 263
D	THR 11	VAL 263
E	THR 11	VAL 263
F	THR 11	VAL 263
G	THR 7	VAL 263
H	THR 11	VAL 263
I	THR 11	VAL 263
J	THR 11	VAL 263
K	THR 7	VAL 263
L	GLY 12	VAL 263

There are149 helices in PDB entry 5H5X. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	12	16	Right-handed 310
Helix 2	AA2	A	29	42	Right-handed alpha
Helix 3	AA3	A	52	65	Right-handed alpha
Helix 4	AA4	A	79	95	Right-handed alpha
Helix 5	AA5	A	112	116	Right-handed 310
Helix 6	AA6	A	117	129	Right-handed alpha
Helix 7	AA7	A	129	146	Right-handed alpha
Helix 8	AA8	A	157	161	Right-handed 310
Helix 9	AA9	A	167	189	Right-handed alpha
Helix 10	AB1	A	214	222	Right-handed alpha
Helix 11	AB2	A	230	243	Right-handed alpha
Helix 12	AB3	A	244	247	Right-handed 310
Helix 13	AB4	A	259	263	Right-handed 310
Helix 14	AB5	B	29	42	Right-handed alpha
Helix 15	AB6	B	52	65	Right-handed alpha
Helix 16	AB7	B	79	95	Right-handed alpha
Helix 17	AB8	B	112	116	Right-handed 310
Helix 18	AB9	B	117	129	Right-handed alpha
Helix 19	AC1	B	129	145	Right-handed alpha
Helix 20	AC2	B	157	161	Right-handed 310
Helix 21	AC3	B	167	189	Right-handed alpha
Helix 22	AC4	B	207	211	Right-handed 310
Helix 23	AC5	B	212	222	Right-handed alpha
Helix 24	AC6	B	230	243	Right-handed alpha
Helix 25	AC7	B	244	247	Right-handed 310
Helix 26	AC8	B	259	263	Right-handed 310
Helix 27	AC9	C	8	12	Right-handed alpha
Helix 28	AD1	C	29	42	Right-handed alpha
Helix 29	AD2	C	52	66	Right-handed alpha
Helix 30	AD3	C	79	95	Right-handed alpha
Helix 31	AD4	C	117	129	Right-handed alpha
Helix 32	AD5	C	129	145	Right-handed alpha
Helix 33	AD6	C	157	161	Right-handed 310
Helix 34	AD7	C	167	189	Right-handed alpha
Helix 35	AD8	C	205	210	Right-handed 310
Helix 36	AD9	C	212	221	Right-handed alpha
Helix 37	AE1	C	230	243	Right-handed alpha
Helix 38	AE2	C	244	247	Right-handed 310
Helix 39	AE3	C	259	263	Right-handed 310
Helix 40	AE4	D	29	42	Right-handed alpha
Helix 41	AE5	D	52	66	Right-handed alpha
Helix 42	AE6	D	79	95	Right-handed alpha
Helix 43	AE7	D	112	116	Right-handed 310
Helix 44	AE8	D	117	129	Right-handed alpha
Helix 45	AE9	D	129	146	Right-handed alpha
Helix 46	AF1	D	157	161	Right-handed 310
Helix 47	AF2	D	167	189	Right-handed alpha
Helix 48	AF3	D	212	222	Right-handed alpha
Helix 49	AF4	D	230	243	Right-handed alpha
Helix 50	AF5	D	244	247	Right-handed 310
Helix 51	AF6	D	259	263	Right-handed 310
Helix 52	AF7	E	12	16	Right-handed 310
Helix 53	AF8	E	29	42	Right-handed alpha
Helix 54	AF9	E	52	65	Right-handed alpha
Helix 55	AG1	E	79	95	Right-handed alpha
Helix 56	AG2	E	112	116	Right-handed 310
Helix 57	AG3	E	117	129	Right-handed alpha
Helix 58	AG4	E	129	146	Right-handed alpha
Helix 59	AG5	E	157	161	Right-handed 310
Helix 60	AG6	E	167	189	Right-handed alpha
Helix 61	AG7	E	213	221	Right-handed alpha
Helix 62	AG8	E	231	243	Right-handed alpha
Helix 63	AG9	E	244	247	Right-handed 310
Helix 64	AH1	E	259	263	Right-handed 310
Helix 65	AH2	F	29	42	Right-handed alpha
Helix 66	AH3	F	52	65	Right-handed alpha
Helix 67	AH4	F	79	95	Right-handed alpha
Helix 68	AH5	F	112	116	Right-handed 310
Helix 69	AH6	F	117	129	Right-handed alpha
Helix 70	AH7	F	129	146	Right-handed alpha
Helix 71	AH8	F	157	161	Right-handed 310
Helix 72	AH9	F	167	189	Right-handed alpha
Helix 73	AI1	F	205	209	Right-handed 310
Helix 74	AI2	F	212	222	Right-handed alpha
Helix 75	AI3	F	230	243	Right-handed alpha
Helix 76	AI4	F	244	247	Right-handed 310
Helix 77	AI5	F	259	263	Right-handed 310
Helix 78	AI6	G	8	12	Right-handed alpha
Helix 79	AI7	G	29	42	Right-handed alpha
Helix 80	AI8	G	52	66	Right-handed alpha
Helix 81	AI9	G	79	95	Right-handed alpha
Helix 82	AJ1	G	112	116	Right-handed 310
Helix 83	AJ2	G	117	129	Right-handed alpha
Helix 84	AJ3	G	129	145	Right-handed alpha
Helix 85	AJ4	G	157	161	Right-handed 310
Helix 86	AJ5	G	167	189	Right-handed alpha
Helix 87	AJ6	G	212	223	Right-handed alpha
Helix 88	AJ7	G	230	243	Right-handed alpha
Helix 89	AJ8	G	244	247	Right-handed 310
Helix 90	AJ9	H	29	42	Right-handed alpha
Helix 91	AK1	H	52	66	Right-handed alpha
Helix 92	AK2	H	79	95	Right-handed alpha
Helix 93	AK3	H	117	129	Right-handed alpha
Helix 94	AK4	H	129	145	Right-handed alpha
Helix 95	AK5	H	157	161	Right-handed 310
Helix 96	AK6	H	167	189	Right-handed alpha
Helix 97	AK7	H	212	222	Right-handed alpha
Helix 98	AK8	H	230	243	Right-handed alpha
Helix 99	AK9	H	244	247	Right-handed 310
Helix 100	AL1	H	259	263	Right-handed 310
Helix 101	AL2	I	12	16	Right-handed 310
Helix 102	AL3	I	29	41	Right-handed alpha
Helix 103	AL4	I	52	65	Right-handed alpha
Helix 104	AL5	I	79	95	Right-handed alpha
Helix 105	AL6	I	112	116	Right-handed 310
Helix 106	AL7	I	117	129	Right-handed alpha
Helix 107	AL8	I	129	147	Right-handed alpha
Helix 108	AL9	I	157	161	Right-handed 310
Helix 109	AM1	I	167	189	Right-handed alpha
Helix 110	AM2	I	190	192	Right-handed 310
Helix 111	AM3	I	217	222	Right-handed alpha
Helix 112	AM4	I	230	243	Right-handed alpha
Helix 113	AM5	I	244	247	Right-handed 310
Helix 114	AM6	I	259	263	Right-handed 310
Helix 115	AM7	J	29	42	Right-handed alpha
Helix 116	AM8	J	52	65	Right-handed alpha
Helix 117	AM9	J	79	95	Right-handed alpha
Helix 118	AN1	J	112	116	Right-handed 310
Helix 119	AN2	J	117	129	Right-handed alpha
Helix 120	AN3	J	129	145	Right-handed alpha
Helix 121	AN4	J	157	161	Right-handed 310
Helix 122	AN5	J	167	189	Right-handed alpha
Helix 123	AN6	J	207	211	Right-handed 310
Helix 124	AN7	J	212	222	Right-handed alpha
Helix 125	AN8	J	230	243	Right-handed alpha
Helix 126	AN9	J	244	247	Right-handed 310
Helix 127	AO1	K	8	12	Right-handed alpha
Helix 128	AO2	K	29	42	Right-handed alpha
Helix 129	AO3	K	52	66	Right-handed alpha
Helix 130	AO4	K	79	95	Right-handed alpha
Helix 131	AO5	K	112	116	Right-handed 310
Helix 132	AO6	K	117	129	Right-handed alpha
Helix 133	AO7	K	129	146	Right-handed alpha
Helix 134	AO8	K	157	161	Right-handed 310
Helix 135	AO9	K	167	189	Right-handed alpha
Helix 136	AP1	K	213	222	Right-handed alpha
Helix 137	AP2	K	230	243	Right-handed alpha
Helix 138	AP3	K	244	247	Right-handed 310
Helix 139	AP4	L	29	41	Right-handed alpha
Helix 140	AP5	L	52	66	Right-handed alpha
Helix 141	AP6	L	79	95	Right-handed alpha
Helix 142	AP7	L	112	116	Right-handed 310
Helix 143	AP8	L	117	129	Right-handed alpha
Helix 144	AP9	L	129	145	Right-handed alpha
Helix 145	AQ1	L	157	161	Right-handed 310
Helix 146	AQ2	L	167	189	Right-handed alpha
Helix 147	AQ3	L	213	221	Right-handed alpha
Helix 148	AQ4	L	230	243	Right-handed alpha
Helix 149	AQ5	L	244	247	Right-handed 310

There are 13 sheets in PDB entry 5H5X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	70	74	first strand
Strand 2	A	45	50	parallel
Strand 3	A	21	25	parallel
Strand 4	A	99	102	parallel
Strand 5	A	151	155	parallel
Strand 6	A	194	200	parallel
Strand 7	A	253	256	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	70	74	first strand
Strand 2	B	45	50	parallel
Strand 3	B	21	25	parallel
Strand 4	B	99	102	parallel
Strand 5	B	150	155	parallel
Strand 6	B	193	200	parallel
Strand 7	B	253	256	parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	70	74	first strand
Strand 2	C	45	50	parallel
Strand 3	C	21	25	parallel
Strand 4	C	99	102	parallel
Strand 5	C	150	155	parallel
Strand 6	C	193	200	parallel
Strand 7	C	253	256	parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	70	74	first strand
Strand 2	D	45	50	parallel
Strand 3	D	21	25	parallel
Strand 4	D	99	102	parallel
Strand 5	D	150	155	parallel
Strand 6	D	193	200	parallel
Strand 7	D	253	256	parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	70	74	first strand
Strand 2	E	45	50	parallel
Strand 3	E	21	25	parallel
Strand 4	E	99	102	parallel
Strand 5	E	150	155	parallel
Strand 6	E	193	200	parallel
Strand 7	E	253	256	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	203	204	first strand
Strand 2	E	229	230	parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	70	74	first strand
Strand 2	F	45	50	parallel
Strand 3	F	21	25	parallel
Strand 4	F	99	102	parallel
Strand 5	F	150	155	parallel
Strand 6	F	193	200	parallel
Strand 7	F	253	256	parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	70	74	first strand
Strand 2	G	45	50	parallel
Strand 3	G	21	24	parallel
Strand 4	G	99	102	parallel
Strand 5	G	150	155	parallel
Strand 6	G	193	200	parallel
Strand 7	G	253	256	parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	70	74	first strand
Strand 2	H	45	50	parallel
Strand 3	H	21	25	parallel
Strand 4	H	99	102	parallel
Strand 5	H	150	155	parallel
Strand 6	H	193	200	parallel
Strand 7	H	253	256	parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	70	74	first strand
Strand 2	I	45	50	parallel
Strand 3	I	21	25	parallel
Strand 4	I	99	102	parallel
Strand 5	I	151	155	parallel
Strand 6	I	194	200	parallel
Strand 7	I	253	256	parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	70	74	first strand
Strand 2	J	45	50	parallel
Strand 3	J	21	25	parallel
Strand 4	J	99	102	parallel
Strand 5	J	150	155	parallel
Strand 6	J	193	200	parallel
Strand 7	J	253	256	parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	70	74	first strand
Strand 2	K	45	50	parallel
Strand 3	K	21	25	parallel
Strand 4	K	99	102	parallel
Strand 5	K	150	155	parallel
Strand 6	K	193	200	parallel
Strand 7	K	253	256	parallel

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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	70	74	first strand
Strand 2	L	45	50	parallel
Strand 3	L	21	25	parallel
Strand 4	L	99	102	parallel
Strand 5	L	150	155	parallel
Strand 6	L	193	200	parallel
Strand 7	L	253	256	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5H5X

Analysis of interatomic Contacts of Structural Units in PDB entry:
5H5X