Analysis of interatomic Contacts of Structural Units in PDB entry:
5H66


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5H66 entry

There are 3 chains in PDB entry 5H66 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 199
B
 MET 999GLU 1179
C
 PRO 180GLU 246
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 5H66. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
36 48Right-handed alpha
Helix 2
AA2
A
120 131Right-handed alpha
Helix 3
AA3
A
143 151Right-handed alpha
Helix 4
AA4
A
153 166Right-handed alpha
Helix 5
AA5
A
167 197Right-handed alpha
Helix 6
AA6
B
1001 1053Right-handed alpha
Helix 7
AA7
B
1087 1089Right-handed 310
Helix 8
AA8
B
1090 1109Right-handed alpha
Helix 9
AA9
B
1124 1126Right-handed 310
Helix 10
AB1
B
1127 1139Right-handed alpha
Helix 11
AB2
B
1150 1156Right-handed alpha
Helix 12
AB3
C
181 195Right-handed alpha
Helix 13
AB4
C
202 204Right-handed 310
Helix 14
AB5
C
209 226Right-handed alpha
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There are 4 sheets in PDB entry 5H66. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 21first strand
Strand 2
A
2 9anti-parallel
Strand 3
A
77 85anti-parallel
Strand 4
A
97 105anti-parallel
Strand 5
A
110 114anti-parallel
Strand 6
A
117 119anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
140 142first strand
Strand 2
B
1113 1117parallel
Strand 3
B
1143 1147parallel
Strand 4
A
26 30parallel
Strand 5
B
1159 1167parallel
Strand 6
B
1170 1177anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1056 1061first strand
Strand 2
B
1072 1077anti-parallel
Strand 3
B
1084 1085anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
199 200first strand
Strand 2
C
240 244anti-parallel
Strand 3
C
229 233anti-parallel
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