Analysis of interatomic Contacts of Structural Units in PDB entry:
5H68


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5H68 entry

There are 2 chains in PDB entry 5H68 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1SER 1187
B
 MET 1ARG 1186
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 5H68. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
36 48Right-handed alpha
Helix 2
AA2
A
53 57Right-handed 310
Helix 3
AA3
A
60 65Right-handed 310
Helix 4
AA4
A
120 129Right-handed alpha
Helix 5
AA5
A
145 149Right-handed 310
Helix 6
AA6
A
153 166Right-handed alpha
Helix 7
AA7
A
1032 1053Right-handed alpha
Helix 8
AA8
A
1085 1089Right-handed 310
Helix 9
AA9
A
1090 1109Right-handed alpha
Helix 10
AB1
A
1124 1139Right-handed alpha
Helix 11
AB2
A
1150 1157Right-handed alpha
Helix 12
AB3
A
1177 1185Right-handed 310
Helix 13
AB4
B
36 48Right-handed alpha
Helix 14
AB5
B
53 57Right-handed 310
Helix 15
AB6
B
60 65Right-handed 310
Helix 16
AB7
B
120 129Right-handed alpha
Helix 17
AB8
B
147 152Right-handed alpha
Helix 18
AB9
B
153 165Right-handed alpha
Helix 19
AC1
B
1023 1053Right-handed alpha
Helix 20
AC2
B
1085 1089Right-handed 310
Helix 21
AC3
B
1090 1109Right-handed alpha
Helix 22
AC4
B
1124 1139Right-handed alpha
Helix 23
AC5
B
1150 1155Right-handed alpha
Helix 24
AC6
B
1177 1181Right-handed 310
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There are 6 sheets in PDB entry 5H68. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 21first strand
Strand 2
A
2 9anti-parallel
Strand 3
A
77 85anti-parallel
Strand 4
A
97 105anti-parallel
Strand 5
A
110 114anti-parallel
Strand 6
A
117 118anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
140 141first strand
Strand 2
A
1113 1117parallel
Strand 3
A
1143 1147parallel
Strand 4
A
26 30parallel
Strand 5
A
1159 1164parallel
Strand 6
A
1172 1175anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1056 1061first strand
Strand 2
A
1072 1077anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
18 21first strand
Strand 2
B
3 9anti-parallel
Strand 3
B
77 85anti-parallel
Strand 4
B
97 105anti-parallel
Strand 5
B
110 114anti-parallel
Strand 6
B
117 119anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
140 141first strand
Strand 2
B
1113 1117parallel
Strand 3
B
1143 1147parallel
Strand 4
B
26 30parallel
Strand 5
B
1159 1164parallel
Strand 6
B
1172 1175anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1056 1061first strand
Strand 2
B
1072 1077anti-parallel
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