Analysis of interatomic Contacts of Structural Units in PDB entry:
5H69


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5H69 entry

There are 2 chains in PDB entry 5H69 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 461ALA 712
B
 HIS 461GLU 709
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 5H69. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
461 499Right-handed alpha
Helix 2
AA2
A
504 513Right-handed alpha
Helix 3
AA3
A
524 528Right-handed alpha
Helix 4
AA4
A
531 533Right-handed 310
Helix 5
AA5
A
534 543Right-handed alpha
Helix 6
AA6
A
544 547Right-handed 310
Helix 7
AA7
A
553 568Right-handed alpha
Helix 8
AA8
A
586 595Right-handed alpha
Helix 9
AA9
A
604 606Right-handed 310
Helix 10
AB1
A
610 612Right-handed 310
Helix 11
AB2
A
613 622Right-handed alpha
Helix 12
AB3
A
629 640Right-handed alpha
Helix 13
AB4
A
657 659Right-handed 310
Helix 14
AB5
A
671 711Right-handed alpha
Helix 15
AB6
B
462 499Right-handed alpha
Helix 16
AB7
B
504 513Right-handed alpha
Helix 17
AB8
B
524 528Right-handed alpha
Helix 18
AB9
B
531 533Right-handed 310
Helix 19
AC1
B
534 543Right-handed alpha
Helix 20
AC2
B
544 547Right-handed 310
Helix 21
AC3
B
553 568Right-handed alpha
Helix 22
AC4
B
586 594Right-handed alpha
Helix 23
AC5
B
604 607Right-handed 310
Helix 24
AC6
B
610 612Right-handed 310
Helix 25
AC7
B
613 622Right-handed alpha
Helix 26
AC8
B
629 640Right-handed alpha
Helix 27
AC9
B
673 709Right-handed alpha
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There are 3 sheets in PDB entry 5H69. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
520 523first strand
Strand 2
A
549 551anti-parallel
Strand 3
A
570 576parallel
Strand 4
B
660 664anti-parallel
Strand 5
B
653 654anti-parallel
Strand 6
B
645 648anti-parallel
Strand 7
B
624 627parallel
Strand 8
B
599 602anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
599 602first strand
Strand 2
A
624 627anti-parallel
Strand 3
A
645 648parallel
Strand 4
A
653 654anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
661 663first strand
Strand 2
B
571 576anti-parallel
Strand 3
B
549 551parallel
Strand 4
B
520 523anti-parallel
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