Analysis of interatomic Contacts of Structural Units in PDB entry:
5H6G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5H6G entry

There are 3 chains in PDB entry 5H6G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 13GLY 265
B
 THR 13HIS 266
C
 THR 13GLY 265
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 5H6G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
43 47Right-handed 310
Helix 2
AA2
A
48 55Right-handed alpha
Helix 3
AA3
A
79 99Right-handed alpha
Helix 4
AA4
A
109 114Right-handed alpha
Helix 5
AA5
A
114 122Right-handed alpha
Helix 6
AA6
A
123 126Right-handed 310
Helix 7
AA7
A
142 148Right-handed alpha
Helix 8
AA8
A
149 153Right-handed 310
Helix 9
AA9
A
156 160Right-handed 310
Helix 10
AB1
A
164 169Right-handed alpha
Helix 11
AB2
A
174 182Right-handed alpha
Helix 12
AB3
A
205 210Right-handed 310
Helix 13
AB4
A
221 225Right-handed alpha
Helix 14
AB5
A
231 238Right-handed alpha
Helix 15
AB6
A
239 251Right-handed alpha
Helix 16
AB7
A
252 255Right-handed 310
Helix 17
AB8
A
259 264Right-handed 310
Helix 18
AB9
B
43 47Right-handed 310
Helix 19
AC1
B
48 56Right-handed alpha
Helix 20
AC2
B
79 99Right-handed alpha
Helix 21
AC3
B
109 114Right-handed alpha
Helix 22
AC4
B
114 122Right-handed alpha
Helix 23
AC5
B
123 126Right-handed 310
Helix 24
AC6
B
142 148Right-handed alpha
Helix 25
AC7
B
149 153Right-handed 310
Helix 26
AC8
B
156 160Right-handed 310
Helix 27
AC9
B
164 169Right-handed alpha
Helix 28
AD1
B
174 181Right-handed alpha
Helix 29
AD2
B
205 210Right-handed 310
Helix 30
AD3
B
221 225Right-handed alpha
Helix 31
AD4
B
231 238Right-handed alpha
Helix 32
AD5
B
239 251Right-handed alpha
Helix 33
AD6
B
252 255Right-handed 310
Helix 34
AD7
B
259 264Right-handed 310
Helix 35
AD8
C
43 47Right-handed 310
Helix 36
AD9
C
48 56Right-handed alpha
Helix 37
AE1
C
79 99Right-handed alpha
Helix 38
AE2
C
109 114Right-handed alpha
Helix 39
AE3
C
114 122Right-handed alpha
Helix 40
AE4
C
142 148Right-handed alpha
Helix 41
AE5
C
149 153Right-handed 310
Helix 42
AE6
C
164 169Right-handed alpha
Helix 43
AE7
C
174 182Right-handed alpha
Helix 44
AE8
C
205 210Right-handed 310
Helix 45
AE9
C
221 225Right-handed alpha
Helix 46
AF1
C
231 238Right-handed alpha
Helix 47
AF2
C
239 250Right-handed alpha
Helix 48
AF3
C
251 255Right-handed 310
Helix 49
AF4
C
259 264Right-handed 310
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There are 3 sheets in PDB entry 5H6G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 17first strand
Strand 2
A
59 63parallel
Strand 3
A
32 35parallel
Strand 4
A
103 108parallel
Strand 5
A
128 134parallel
Strand 6
A
191 196parallel
Strand 7
A
216 220parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
16 17first strand
Strand 2
B
59 63parallel
Strand 3
B
32 35parallel
Strand 4
B
103 108parallel
Strand 5
B
128 134parallel
Strand 6
B
191 196parallel
Strand 7
B
216 220parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
16 17first strand
Strand 2
C
59 63parallel
Strand 3
C
32 35parallel
Strand 4
C
103 108parallel
Strand 5
C
128 134parallel
Strand 6
C
191 196parallel
Strand 7
C
216 220parallel
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