Analysis of interatomic Contacts of Structural Units in PDB entry:
5H6I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5H6I entry

There are 3 chains in PDB entry 5H6I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 41LYS 255
B
 SER 43LYS 255
C
 ALA 47LYS 255
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 5H6I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
43 68Right-handed alpha
Helix 2
AA2
A
73 94Right-handed alpha
Helix 3
AA3
A
95 98Right-handed 310
Helix 4
AA4
A
101 125Right-handed alpha
Helix 5
AA5
A
129 149Right-handed alpha
Helix 6
AA6
A
153 173Right-handed alpha
Helix 7
AA7
A
187 206Right-handed alpha
Helix 8
AA8
A
211 230Right-handed alpha
Helix 9
AA9
A
235 255Right-handed alpha
Helix 10
AB1
B
45 66Right-handed alpha
Helix 11
AB2
B
73 91Right-handed alpha
Helix 12
AB3
B
100 125Right-handed alpha
Helix 13
AB4
B
129 149Right-handed alpha
Helix 14
AB5
B
153 172Right-handed alpha
Helix 15
AB6
B
186 206Right-handed alpha
Helix 16
AB7
B
211 231Right-handed alpha
Helix 17
AB8
B
235 255Right-handed alpha
Helix 18
AB9
C
49 69Right-handed alpha
Helix 19
AC1
C
73 91Right-handed alpha
Helix 20
AC2
C
107 125Right-handed alpha
Helix 21
AC3
C
126 128Right-handed 310
Helix 22
AC4
C
129 149Right-handed alpha
Helix 23
AC5
C
153 169Right-handed alpha
Helix 24
AC6
C
184 206Right-handed alpha
Helix 25
AC7
C
211 231Right-handed alpha
Helix 26
AC8
C
235 255Right-handed alpha
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There are no sheets in PDB entry 5H6I
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il