Analysis of interatomic Contacts of Structural Units in PDB entry:
5H6L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5H6L entry

There are 2 chains in PDB entry 5H6L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 7ASP 228
B
 TYR 7GLN 229
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 5H6L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 23Right-handed alpha
Helix 2
AA2
A
24 34Right-handed alpha
Helix 3
AA3
A
37 44Right-handed alpha
Helix 4
AA4
A
64 66Right-handed 310
Helix 5
AA5
A
75 83Right-handed alpha
Helix 6
AA6
A
94 99Right-handed alpha
Helix 7
AA7
A
99 106Right-handed alpha
Helix 8
AA8
A
119 123Right-handed 310
Helix 9
AA9
A
150 155Right-handed alpha
Helix 10
AB1
A
156 158Right-handed 310
Helix 11
AB2
A
160 163Right-handed 310
Helix 12
AB3
A
173 175Right-handed 310
Helix 13
AB4
B
17 22Right-handed alpha
Helix 14
AB5
B
24 34Right-handed alpha
Helix 15
AB6
B
37 44Right-handed alpha
Helix 16
AB7
B
64 66Right-handed 310
Helix 17
AB8
B
75 83Right-handed alpha
Helix 18
AB9
B
94 99Right-handed alpha
Helix 19
AC1
B
99 107Right-handed alpha
Helix 20
AC2
B
150 155Right-handed alpha
Helix 21
AC3
B
156 158Right-handed 310
Helix 22
AC4
B
160 163Right-handed 310
Helix 23
AC5
B
173 175Right-handed 310
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There are 4 sheets in PDB entry 5H6L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 54first strand
Strand 2
A
60 62anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
148 149first strand
Strand 2
A
165 169anti-parallel
Strand 3
A
112 117anti-parallel
Strand 4
A
68 72anti-parallel
Strand 5
A
136 142anti-parallel
Strand 6
A
177 184anti-parallel
Strand 7
A
188 193anti-parallel
Strand 8
A
214 216parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
52 54first strand
Strand 2
B
60 62anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
148 149first strand
Strand 2
B
165 169anti-parallel
Strand 3
B
112 117anti-parallel
Strand 4
B
68 72anti-parallel
Strand 5
B
136 142anti-parallel
Strand 6
B
177 184anti-parallel
Strand 7
B
187 193anti-parallel
Strand 8
B
214 216parallel
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