Analysis of interatomic Contacts of Structural Units in PDB entry:
5H7K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5H7K entry

There is 1 chain in PDB entry 5H7K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 6LEU 386
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 5H7K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 19Right-handed alpha
Helix 2
AA2
A
20 22Right-handed 310
Helix 3
AA3
A
36 48Right-handed alpha
Helix 4
AA4
A
105 115Right-handed alpha
Helix 5
AA5
A
129 142Right-handed alpha
Helix 6
AA6
A
152 159Right-handed alpha
Helix 7
AA7
A
163 186Right-handed alpha
Helix 8
AA8
A
187 191Right-handed 310
Helix 9
AA9
A
215 223Right-handed alpha
Helix 10
AB1
A
225 236Right-handed alpha
Helix 11
AB2
A
237 245Right-handed alpha
Helix 12
AB3
A
246 259Right-handed alpha
Helix 13
AB4
A
261 274Right-handed alpha
Helix 14
AB5
A
280 288Right-handed alpha
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There are 3 sheets in PDB entry 5H7K. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 86first strand
Strand 2
A
89 96anti-parallel
Strand 3
A
24 31parallel
Strand 4
A
117 123parallel
Strand 5
A
145 151parallel
Strand 6
A
203 207parallel
Strand 7
A
212 214anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
334 337first strand
Strand 2
A
326 329anti-parallel
Strand 3
A
374 376anti-parallel
Strand 4
A
296 305anti-parallel
Strand 5
A
309 318anti-parallel
Strand 6
A
360 363anti-parallel
Strand 7
A
341 345anti-parallel
Strand 8
A
348 351anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
320 322first strand
Strand 2
A
354 356anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il